Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vps54Q5SPW0 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vps54Q5SPW0 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vps54Q5SPW0 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vps54Q5SPW0 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vps54Q5SPW0 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vps54Q5SPW0 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Vps54Q5SPW0 Sybu-209ENSMUST00000228639 4113 ntBASIC18.08■□□□□ 0.49
Vps54Q5SPW0 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC18.08■□□□□ 0.49
Vps54Q5SPW0 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vps54Q5SPW0 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.08■□□□□ 0.49
Vps54Q5SPW0 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vps54Q5SPW0 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.08■□□□□ 0.49
Vps54Q5SPW0 Gm13410-201ENSMUST00000117058 1415 ntBASIC18.08■□□□□ 0.49
Vps54Q5SPW0 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC18.08■□□□□ 0.49
Vps54Q5SPW0 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vps54Q5SPW0 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps54Q5SPW0 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps54Q5SPW0 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps54Q5SPW0 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps54Q5SPW0 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC18.08■□□□□ 0.48
Vps54Q5SPW0 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC18.08■□□□□ 0.48
Vps54Q5SPW0 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC18.08■□□□□ 0.48
Vps54Q5SPW0 CT025555.1-201ENSMUST00000225901 1217 ntBASIC18.08■□□□□ 0.48
Vps54Q5SPW0 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps54Q5SPW0 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps54Q5SPW0 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps54Q5SPW0 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps54Q5SPW0 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps54Q5SPW0 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps54Q5SPW0 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps54Q5SPW0 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC18.08■□□□□ 0.48
Vps54Q5SPW0 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps54Q5SPW0 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC18.08■□□□□ 0.48
Vps54Q5SPW0 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vps54Q5SPW0 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Vps54Q5SPW0 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps54Q5SPW0 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Vps54Q5SPW0 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Vps54Q5SPW0 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps54Q5SPW0 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC18.07■□□□□ 0.48
Vps54Q5SPW0 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC18.07■□□□□ 0.48
Vps54Q5SPW0 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC18.07■□□□□ 0.48
Vps54Q5SPW0 Gm6736-201ENSMUST00000166583 948 ntBASIC18.07■□□□□ 0.48
Vps54Q5SPW0 Gm2756-201ENSMUST00000195851 400 ntBASIC18.07■□□□□ 0.48
Vps54Q5SPW0 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC18.07■□□□□ 0.48
Vps54Q5SPW0 AC124549.3-201ENSMUST00000225541 367 ntBASIC18.07■□□□□ 0.48
Vps54Q5SPW0 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps54Q5SPW0 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Vps54Q5SPW0 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps54Q5SPW0 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Vps54Q5SPW0 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps54Q5SPW0 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps54Q5SPW0 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps54Q5SPW0 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Vps54Q5SPW0 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Vps54Q5SPW0 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps54Q5SPW0 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Vps54Q5SPW0 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
Vps54Q5SPW0 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Vps54Q5SPW0 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vps54Q5SPW0 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps54Q5SPW0 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps54Q5SPW0 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps54Q5SPW0 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Vps54Q5SPW0 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Vps54Q5SPW0 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps54Q5SPW0 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps54Q5SPW0 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.06■□□□□ 0.48
Vps54Q5SPW0 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps54Q5SPW0 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps54Q5SPW0 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps54Q5SPW0 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Vps54Q5SPW0 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Vps54Q5SPW0 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC18.06■□□□□ 0.48
Vps54Q5SPW0 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC18.06■□□□□ 0.48
Vps54Q5SPW0 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC18.06■□□□□ 0.48
Vps54Q5SPW0 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps54Q5SPW0 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps54Q5SPW0 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps54Q5SPW0 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps54Q5SPW0 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps54Q5SPW0 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps54Q5SPW0 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC18.06■□□□□ 0.48
Vps54Q5SPW0 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC18.06■□□□□ 0.48
Vps54Q5SPW0 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps54Q5SPW0 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vps54Q5SPW0 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Vps54Q5SPW0 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps54Q5SPW0 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps54Q5SPW0 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Vps54Q5SPW0 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Vps54Q5SPW0 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC18.05■□□□□ 0.48
Vps54Q5SPW0 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Vps54Q5SPW0 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vps54Q5SPW0 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Vps54Q5SPW0 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Vps54Q5SPW0 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC18.05■□□□□ 0.48
Vps54Q5SPW0 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC18.05■□□□□ 0.48
Vps54Q5SPW0 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms