Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.27□□□□□ -0.6
Trav7-2Q5R1I3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav7-2Q5R1I3 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC11.27□□□□□ -0.6
Trav7-2Q5R1I3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC11.27□□□□□ -0.6
Trav7-2Q5R1I3 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav7-2Q5R1I3 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav7-2Q5R1I3 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav7-2Q5R1I3 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav7-2Q5R1I3 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav7-2Q5R1I3 Gm27528-202ENSMUST00000222916 2012 ntBASIC11.27□□□□□ -0.61
Trav7-2Q5R1I3 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav7-2Q5R1I3 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav7-2Q5R1I3 Gm9103-201ENSMUST00000119371 405 ntBASIC11.27□□□□□ -0.61
Trav7-2Q5R1I3 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC11.27□□□□□ -0.61
Trav7-2Q5R1I3 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav7-2Q5R1I3 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav7-2Q5R1I3 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC11.27□□□□□ -0.61
Trav7-2Q5R1I3 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav7-2Q5R1I3 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav7-2Q5R1I3 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav7-2Q5R1I3 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav7-2Q5R1I3 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav7-2Q5R1I3 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav7-2Q5R1I3 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav7-2Q5R1I3 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trav7-2Q5R1I3 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav7-2Q5R1I3 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav7-2Q5R1I3 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav7-2Q5R1I3 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav7-2Q5R1I3 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav7-2Q5R1I3 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav7-2Q5R1I3 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav7-2Q5R1I3 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav7-2Q5R1I3 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav7-2Q5R1I3 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav7-2Q5R1I3 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav7-2Q5R1I3 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav7-2Q5R1I3 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav7-2Q5R1I3 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav7-2Q5R1I3 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav7-2Q5R1I3 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav7-2Q5R1I3 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav7-2Q5R1I3 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav7-2Q5R1I3 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav7-2Q5R1I3 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav7-2Q5R1I3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav7-2Q5R1I3 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav7-2Q5R1I3 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav7-2Q5R1I3 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC11.26□□□□□ -0.61
Trav7-2Q5R1I3 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav7-2Q5R1I3 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav7-2Q5R1I3 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav7-2Q5R1I3 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav7-2Q5R1I3 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav7-2Q5R1I3 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav7-2Q5R1I3 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav7-2Q5R1I3 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav7-2Q5R1I3 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav7-2Q5R1I3 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav7-2Q5R1I3 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav7-2Q5R1I3 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav7-2Q5R1I3 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav7-2Q5R1I3 Gm5837-201ENSMUST00000191844 1369 ntBASIC11.26□□□□□ -0.61
Trav7-2Q5R1I3 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav7-2Q5R1I3 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav7-2Q5R1I3 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav7-2Q5R1I3 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav7-2Q5R1I3 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav7-2Q5R1I3 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav7-2Q5R1I3 Gm8784-201ENSMUST00000222096 1435 ntBASIC11.26□□□□□ -0.61
Trav7-2Q5R1I3 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav7-2Q5R1I3 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC11.25□□□□□ -0.61
Trav7-2Q5R1I3 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav7-2Q5R1I3 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav7-2Q5R1I3 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav7-2Q5R1I3 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav7-2Q5R1I3 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav7-2Q5R1I3 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav7-2Q5R1I3 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav7-2Q5R1I3 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav7-2Q5R1I3 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC11.25□□□□□ -0.61
Trav7-2Q5R1I3 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav7-2Q5R1I3 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Trav7-2Q5R1I3 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav7-2Q5R1I3 Gm4459-201ENSMUST00000118750 468 ntBASIC11.25□□□□□ -0.61
Trav7-2Q5R1I3 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav7-2Q5R1I3 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC11.25□□□□□ -0.61
Trav7-2Q5R1I3 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav7-2Q5R1I3 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC11.25□□□□□ -0.61
Trav7-2Q5R1I3 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav7-2Q5R1I3 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav7-2Q5R1I3 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav7-2Q5R1I3 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav7-2Q5R1I3 Gm8655-201ENSMUST00000221159 852 ntBASIC11.25□□□□□ -0.61
Trav7-2Q5R1I3 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC11.25□□□□□ -0.61
Trav7-2Q5R1I3 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav7-2Q5R1I3 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav7-2Q5R1I3 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav7-2Q5R1I3 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav7-2Q5R1I3 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms