Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gm9385-201ENSMUST00000117563 472 ntBASIC12.66□□□□□ -0.38
Trav6d-4Q5R1I0 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav6d-4Q5R1I0 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.66□□□□□ -0.38
Trav6d-4Q5R1I0 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-4Q5R1I0 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-4Q5R1I0 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-4Q5R1I0 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-4Q5R1I0 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-4Q5R1I0 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav6d-4Q5R1I0 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-4Q5R1I0 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-4Q5R1I0 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-4Q5R1I0 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-4Q5R1I0 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-4Q5R1I0 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-4Q5R1I0 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-4Q5R1I0 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-4Q5R1I0 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-4Q5R1I0 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-4Q5R1I0 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav6d-4Q5R1I0 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Trav6d-4Q5R1I0 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav6d-4Q5R1I0 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-4Q5R1I0 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav6d-4Q5R1I0 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-4Q5R1I0 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav6d-4Q5R1I0 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-4Q5R1I0 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-4Q5R1I0 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-4Q5R1I0 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-4Q5R1I0 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.65□□□□□ -0.38
Trav6d-4Q5R1I0 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-4Q5R1I0 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.65□□□□□ -0.38
Trav6d-4Q5R1I0 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.65□□□□□ -0.38
Trav6d-4Q5R1I0 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-4Q5R1I0 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-4Q5R1I0 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.65□□□□□ -0.38
Trav6d-4Q5R1I0 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-4Q5R1I0 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.65□□□□□ -0.38
Trav6d-4Q5R1I0 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-4Q5R1I0 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-4Q5R1I0 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trav6d-4Q5R1I0 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-4Q5R1I0 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-4Q5R1I0 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Trav6d-4Q5R1I0 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-4Q5R1I0 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-4Q5R1I0 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav6d-4Q5R1I0 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-4Q5R1I0 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-4Q5R1I0 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-4Q5R1I0 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-4Q5R1I0 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-4Q5R1I0 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-4Q5R1I0 Celf4-206ENSMUST00000224553 1729 ntBASIC12.65□□□□□ -0.38
Trav6d-4Q5R1I0 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav6d-4Q5R1I0 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Trav6d-4Q5R1I0 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav6d-4Q5R1I0 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.64□□□□□ -0.39
Trav6d-4Q5R1I0 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-4Q5R1I0 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-4Q5R1I0 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Trav6d-4Q5R1I0 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-4Q5R1I0 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.64□□□□□ -0.39
Trav6d-4Q5R1I0 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-4Q5R1I0 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav6d-4Q5R1I0 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-4Q5R1I0 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-4Q5R1I0 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-4Q5R1I0 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav6d-4Q5R1I0 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav6d-4Q5R1I0 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav6d-4Q5R1I0 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-4Q5R1I0 Gm11025-201ENSMUST00000140773 466 ntBASIC12.64□□□□□ -0.39
Trav6d-4Q5R1I0 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.64□□□□□ -0.39
Trav6d-4Q5R1I0 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav6d-4Q5R1I0 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav6d-4Q5R1I0 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.64□□□□□ -0.39
Trav6d-4Q5R1I0 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.64□□□□□ -0.39
Trav6d-4Q5R1I0 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-4Q5R1I0 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-4Q5R1I0 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav6d-4Q5R1I0 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-4Q5R1I0 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Trav6d-4Q5R1I0 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-4Q5R1I0 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-4Q5R1I0 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-4Q5R1I0 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-4Q5R1I0 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-4Q5R1I0 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav6d-4Q5R1I0 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Trav6d-4Q5R1I0 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav6d-4Q5R1I0 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms