Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav7d-4Q5R1H9 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav7d-4Q5R1H9 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trav7d-4Q5R1H9 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav7d-4Q5R1H9 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav7d-4Q5R1H9 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trav7d-4Q5R1H9 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.52□□□□□ -0.57
Trav7d-4Q5R1H9 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav7d-4Q5R1H9 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav7d-4Q5R1H9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav7d-4Q5R1H9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav7d-4Q5R1H9 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav7d-4Q5R1H9 Slc35b2-207ENSMUST00000226086 850 ntBASIC11.52□□□□□ -0.57
Trav7d-4Q5R1H9 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav7d-4Q5R1H9 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav7d-4Q5R1H9 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav7d-4Q5R1H9 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav7d-4Q5R1H9 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.52□□□□□ -0.57
Trav7d-4Q5R1H9 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav7d-4Q5R1H9 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav7d-4Q5R1H9 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav7d-4Q5R1H9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Trav7d-4Q5R1H9 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trav7d-4Q5R1H9 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav7d-4Q5R1H9 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav7d-4Q5R1H9 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Trav7d-4Q5R1H9 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav7d-4Q5R1H9 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.57
Trav7d-4Q5R1H9 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav7d-4Q5R1H9 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav7d-4Q5R1H9 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Trav7d-4Q5R1H9 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav7d-4Q5R1H9 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav7d-4Q5R1H9 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav7d-4Q5R1H9 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav7d-4Q5R1H9 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav7d-4Q5R1H9 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav7d-4Q5R1H9 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav7d-4Q5R1H9 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.51□□□□□ -0.57
Trav7d-4Q5R1H9 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav7d-4Q5R1H9 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav7d-4Q5R1H9 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav7d-4Q5R1H9 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC11.51□□□□□ -0.57
Trav7d-4Q5R1H9 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav7d-4Q5R1H9 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav7d-4Q5R1H9 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav7d-4Q5R1H9 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav7d-4Q5R1H9 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav7d-4Q5R1H9 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC11.51□□□□□ -0.57
Trav7d-4Q5R1H9 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav7d-4Q5R1H9 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav7d-4Q5R1H9 Gm4217-201ENSMUST00000182243 1002 ntBASIC11.51□□□□□ -0.57
Trav7d-4Q5R1H9 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav7d-4Q5R1H9 Gm7370-201ENSMUST00000219471 767 ntBASIC11.51□□□□□ -0.57
Trav7d-4Q5R1H9 AC156016.1-201ENSMUST00000227190 1035 ntBASIC11.51□□□□□ -0.57
Trav7d-4Q5R1H9 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav7d-4Q5R1H9 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav7d-4Q5R1H9 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav7d-4Q5R1H9 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav7d-4Q5R1H9 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav7d-4Q5R1H9 Carlr-201ENSMUST00000181515 2574 ntBASIC11.51□□□□□ -0.57
Trav7d-4Q5R1H9 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav7d-4Q5R1H9 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav7d-4Q5R1H9 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav7d-4Q5R1H9 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav7d-4Q5R1H9 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav7d-4Q5R1H9 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav7d-4Q5R1H9 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav7d-4Q5R1H9 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav7d-4Q5R1H9 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav7d-4Q5R1H9 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.5□□□□□ -0.57
Trav7d-4Q5R1H9 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav7d-4Q5R1H9 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav7d-4Q5R1H9 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav7d-4Q5R1H9 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav7d-4Q5R1H9 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav7d-4Q5R1H9 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav7d-4Q5R1H9 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Trav7d-4Q5R1H9 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav7d-4Q5R1H9 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.5□□□□□ -0.57
Trav7d-4Q5R1H9 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Trav7d-4Q5R1H9 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav7d-4Q5R1H9 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav7d-4Q5R1H9 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav7d-4Q5R1H9 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav7d-4Q5R1H9 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trav7d-4Q5R1H9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav7d-4Q5R1H9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav7d-4Q5R1H9 Gm5643-201ENSMUST00000117081 966 ntBASIC11.5□□□□□ -0.57
Trav7d-4Q5R1H9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav7d-4Q5R1H9 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Trav7d-4Q5R1H9 Gm27463-201ENSMUST00000183569 57 ntBASIC11.5□□□□□ -0.57
Trav7d-4Q5R1H9 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC11.5□□□□□ -0.57
Trav7d-4Q5R1H9 Trmt13-210ENSMUST00000198454 880 ntBASIC11.5□□□□□ -0.57
Trav7d-4Q5R1H9 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav7d-4Q5R1H9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav7d-4Q5R1H9 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trav7d-4Q5R1H9 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav7d-4Q5R1H9 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav7d-4Q5R1H9 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms