Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC11.75□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC11.75□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm7889-201ENSMUST00000185591 958 ntBASIC11.75□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC11.75□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm18101-201ENSMUST00000215769 548 ntBASIC11.75□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm43509-201ENSMUST00000196551 2594 ntBASIC11.75□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm20472-201ENSMUST00000174403 1240 ntBASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm22697-201ENSMUST00000175194 63 ntBASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm22240-201ENSMUST00000175225 82 ntBASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm8349-201ENSMUST00000182720 1003 ntBASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm9484-201ENSMUST00000195892 1159 ntBASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm19164-201ENSMUST00000210667 640 ntBASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 AC159093.1-201ENSMUST00000227779 380 ntBASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.73□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Mir770-201ENSMUST00000103252 94 ntBASIC11.73□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC11.73□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC11.73□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm8242-201ENSMUST00000193029 1420 ntBASIC11.73□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Gm43205-201ENSMUST00000198622 1968 ntBASIC11.73□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav15-1-dv6-1Q5R1D2 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms