Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col27a1Q5QNQ9 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col27a1Q5QNQ9 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col27a1Q5QNQ9 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Col27a1Q5QNQ9 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.29□□□□□ -0.12
Col27a1Q5QNQ9 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col27a1Q5QNQ9 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col27a1Q5QNQ9 Gm27572-201ENSMUST00000183702 255 ntBASIC14.29□□□□□ -0.12
Col27a1Q5QNQ9 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col27a1Q5QNQ9 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col27a1Q5QNQ9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col27a1Q5QNQ9 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col27a1Q5QNQ9 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.29□□□□□ -0.12
Col27a1Q5QNQ9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col27a1Q5QNQ9 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col27a1Q5QNQ9 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col27a1Q5QNQ9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col27a1Q5QNQ9 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col27a1Q5QNQ9 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col27a1Q5QNQ9 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col27a1Q5QNQ9 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col27a1Q5QNQ9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC14.29□□□□□ -0.12
Col27a1Q5QNQ9 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col27a1Q5QNQ9 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col27a1Q5QNQ9 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.29□□□□□ -0.12
Col27a1Q5QNQ9 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Col27a1Q5QNQ9 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col27a1Q5QNQ9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col27a1Q5QNQ9 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col27a1Q5QNQ9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Col27a1Q5QNQ9 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.28□□□□□ -0.12
Col27a1Q5QNQ9 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col27a1Q5QNQ9 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col27a1Q5QNQ9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Col27a1Q5QNQ9 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.28□□□□□ -0.12
Col27a1Q5QNQ9 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.28□□□□□ -0.12
Col27a1Q5QNQ9 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col27a1Q5QNQ9 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col27a1Q5QNQ9 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.28□□□□□ -0.12
Col27a1Q5QNQ9 Gm27514-201ENSMUST00000183692 110 ntBASIC14.28□□□□□ -0.12
Col27a1Q5QNQ9 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col27a1Q5QNQ9 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.28□□□□□ -0.12
Col27a1Q5QNQ9 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col27a1Q5QNQ9 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col27a1Q5QNQ9 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col27a1Q5QNQ9 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col27a1Q5QNQ9 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Col27a1Q5QNQ9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col27a1Q5QNQ9 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Col27a1Q5QNQ9 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col27a1Q5QNQ9 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col27a1Q5QNQ9 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Col27a1Q5QNQ9 Gm8652-201ENSMUST00000181363 964 ntBASIC14.27□□□□□ -0.12
Col27a1Q5QNQ9 Mir8109-201ENSMUST00000184375 117 ntBASIC14.27□□□□□ -0.12
Col27a1Q5QNQ9 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.27□□□□□ -0.12
Col27a1Q5QNQ9 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col27a1Q5QNQ9 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.27□□□□□ -0.12
Col27a1Q5QNQ9 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.27□□□□□ -0.12
Col27a1Q5QNQ9 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Col27a1Q5QNQ9 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.27□□□□□ -0.12
Col27a1Q5QNQ9 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col27a1Q5QNQ9 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Col27a1Q5QNQ9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col27a1Q5QNQ9 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col27a1Q5QNQ9 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.27□□□□□ -0.13
Col27a1Q5QNQ9 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col27a1Q5QNQ9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col27a1Q5QNQ9 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col27a1Q5QNQ9 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col27a1Q5QNQ9 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.27□□□□□ -0.13
Col27a1Q5QNQ9 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col27a1Q5QNQ9 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.27□□□□□ -0.13
Col27a1Q5QNQ9 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Col27a1Q5QNQ9 Mir3102-201ENSMUST00000175555 104 ntBASIC14.27□□□□□ -0.13
Col27a1Q5QNQ9 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.27□□□□□ -0.13
Col27a1Q5QNQ9 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col27a1Q5QNQ9 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col27a1Q5QNQ9 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col27a1Q5QNQ9 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col27a1Q5QNQ9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col27a1Q5QNQ9 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
Col27a1Q5QNQ9 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col27a1Q5QNQ9 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col27a1Q5QNQ9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col27a1Q5QNQ9 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.26□□□□□ -0.13
Col27a1Q5QNQ9 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Col27a1Q5QNQ9 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col27a1Q5QNQ9 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col27a1Q5QNQ9 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col27a1Q5QNQ9 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col27a1Q5QNQ9 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col27a1Q5QNQ9 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.26□□□□□ -0.13
Col27a1Q5QNQ9 Gm24644-201ENSMUST00000157114 139 ntBASIC14.26□□□□□ -0.13
Col27a1Q5QNQ9 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.26□□□□□ -0.13
Col27a1Q5QNQ9 Gm27486-201ENSMUST00000184923 80 ntBASIC14.26□□□□□ -0.13
Col27a1Q5QNQ9 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.26□□□□□ -0.13
Col27a1Q5QNQ9 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.26□□□□□ -0.13
Col27a1Q5QNQ9 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col27a1Q5QNQ9 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col27a1Q5QNQ9 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms