Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf20Q5DTM8 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.96■□□□□ 0.47
Rnf20Q5DTM8 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf20Q5DTM8 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf20Q5DTM8 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf20Q5DTM8 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.96■□□□□ 0.47
Rnf20Q5DTM8 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.96■□□□□ 0.47
Rnf20Q5DTM8 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.96■□□□□ 0.47
Rnf20Q5DTM8 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.96■□□□□ 0.47
Rnf20Q5DTM8 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rnf20Q5DTM8 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf20Q5DTM8 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf20Q5DTM8 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.96■□□□□ 0.47
Rnf20Q5DTM8 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf20Q5DTM8 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf20Q5DTM8 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf20Q5DTM8 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf20Q5DTM8 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Rnf20Q5DTM8 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf20Q5DTM8 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
Rnf20Q5DTM8 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Rnf20Q5DTM8 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf20Q5DTM8 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf20Q5DTM8 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf20Q5DTM8 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf20Q5DTM8 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf20Q5DTM8 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Rnf20Q5DTM8 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf20Q5DTM8 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf20Q5DTM8 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf20Q5DTM8 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf20Q5DTM8 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf20Q5DTM8 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf20Q5DTM8 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.95■□□□□ 0.46
Rnf20Q5DTM8 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf20Q5DTM8 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf20Q5DTM8 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf20Q5DTM8 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf20Q5DTM8 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Rnf20Q5DTM8 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf20Q5DTM8 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf20Q5DTM8 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf20Q5DTM8 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf20Q5DTM8 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf20Q5DTM8 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf20Q5DTM8 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Rnf20Q5DTM8 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.94■□□□□ 0.46
Rnf20Q5DTM8 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf20Q5DTM8 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf20Q5DTM8 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf20Q5DTM8 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf20Q5DTM8 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf20Q5DTM8 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf20Q5DTM8 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Rnf20Q5DTM8 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf20Q5DTM8 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.94■□□□□ 0.46
Rnf20Q5DTM8 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf20Q5DTM8 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf20Q5DTM8 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Rnf20Q5DTM8 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf20Q5DTM8 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf20Q5DTM8 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Rnf20Q5DTM8 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf20Q5DTM8 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf20Q5DTM8 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf20Q5DTM8 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf20Q5DTM8 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf20Q5DTM8 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf20Q5DTM8 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Rnf20Q5DTM8 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.93■□□□□ 0.46
Rnf20Q5DTM8 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.93■□□□□ 0.46
Rnf20Q5DTM8 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.93■□□□□ 0.46
Rnf20Q5DTM8 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf20Q5DTM8 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf20Q5DTM8 Gm38058-201ENSMUST00000194323 4368 ntBASIC17.93■□□□□ 0.46
Rnf20Q5DTM8 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf20Q5DTM8 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf20Q5DTM8 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf20Q5DTM8 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf20Q5DTM8 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf20Q5DTM8 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Rnf20Q5DTM8 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rnf20Q5DTM8 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Rnf20Q5DTM8 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.93■□□□□ 0.46
Rnf20Q5DTM8 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.93■□□□□ 0.46
Rnf20Q5DTM8 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.93■□□□□ 0.46
Rnf20Q5DTM8 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
Rnf20Q5DTM8 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf20Q5DTM8 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf20Q5DTM8 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf20Q5DTM8 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf20Q5DTM8 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Rnf20Q5DTM8 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf20Q5DTM8 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rnf20Q5DTM8 Gm13036-201ENSMUST00000117799 748 ntBASIC17.92■□□□□ 0.46
Rnf20Q5DTM8 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC17.92■□□□□ 0.46
Rnf20Q5DTM8 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.92■□□□□ 0.46
Rnf20Q5DTM8 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.92■□□□□ 0.46
Rnf20Q5DTM8 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.92■□□□□ 0.46
Rnf20Q5DTM8 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms