Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Ddx49Q4FZF3 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx49Q4FZF3 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ddx49Q4FZF3 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Ddx49Q4FZF3 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx49Q4FZF3 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ddx49Q4FZF3 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.52■□□□□ 0.4
Ddx49Q4FZF3 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ddx49Q4FZF3 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx49Q4FZF3 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Ddx49Q4FZF3 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC17.52■□□□□ 0.4
Ddx49Q4FZF3 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx49Q4FZF3 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx49Q4FZF3 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Ddx49Q4FZF3 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx49Q4FZF3 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ddx49Q4FZF3 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx49Q4FZF3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ddx49Q4FZF3 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ddx49Q4FZF3 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ddx49Q4FZF3 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ddx49Q4FZF3 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ddx49Q4FZF3 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ddx49Q4FZF3 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ddx49Q4FZF3 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ddx49Q4FZF3 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ddx49Q4FZF3 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.51■□□□□ 0.39
Ddx49Q4FZF3 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx49Q4FZF3 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.51■□□□□ 0.39
Ddx49Q4FZF3 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx49Q4FZF3 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx49Q4FZF3 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx49Q4FZF3 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx49Q4FZF3 Gm29541-201ENSMUST00000191351 678 ntBASIC17.51■□□□□ 0.39
Ddx49Q4FZF3 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx49Q4FZF3 Gm7730-201ENSMUST00000212486 454 ntBASIC17.51■□□□□ 0.39
Ddx49Q4FZF3 AC124751.1-201ENSMUST00000222716 1408 ntBASIC17.51■□□□□ 0.39
Ddx49Q4FZF3 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx49Q4FZF3 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx49Q4FZF3 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx49Q4FZF3 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx49Q4FZF3 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx49Q4FZF3 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ddx49Q4FZF3 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx49Q4FZF3 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx49Q4FZF3 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx49Q4FZF3 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx49Q4FZF3 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx49Q4FZF3 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx49Q4FZF3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx49Q4FZF3 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx49Q4FZF3 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx49Q4FZF3 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx49Q4FZF3 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx49Q4FZF3 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx49Q4FZF3 Gm14127-201ENSMUST00000117906 678 ntBASIC17.5■□□□□ 0.39
Ddx49Q4FZF3 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.5■□□□□ 0.39
Ddx49Q4FZF3 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.5■□□□□ 0.39
Ddx49Q4FZF3 Gm15483-201ENSMUST00000120338 456 ntBASIC17.5■□□□□ 0.39
Ddx49Q4FZF3 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx49Q4FZF3 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC17.5■□□□□ 0.39
Ddx49Q4FZF3 Gm16026-204ENSMUST00000162652 683 ntBASIC17.5■□□□□ 0.39
Ddx49Q4FZF3 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC17.5■□□□□ 0.39
Ddx49Q4FZF3 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC17.5■□□□□ 0.39
Ddx49Q4FZF3 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ddx49Q4FZF3 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC17.5■□□□□ 0.39
Ddx49Q4FZF3 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx49Q4FZF3 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx49Q4FZF3 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.5■□□□□ 0.39
Ddx49Q4FZF3 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ddx49Q4FZF3 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx49Q4FZF3 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx49Q4FZF3 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.5■□□□□ 0.39
Ddx49Q4FZF3 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx49Q4FZF3 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC17.5■□□□□ 0.39
Ddx49Q4FZF3 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx49Q4FZF3 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx49Q4FZF3 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx49Q4FZF3 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx49Q4FZF3 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx49Q4FZF3 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx49Q4FZF3 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Ddx49Q4FZF3 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx49Q4FZF3 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx49Q4FZF3 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx49Q4FZF3 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx49Q4FZF3 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx49Q4FZF3 Gm13015-201ENSMUST00000118674 204 ntBASIC17.49■□□□□ 0.39
Ddx49Q4FZF3 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC17.49■□□□□ 0.39
Ddx49Q4FZF3 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ddx49Q4FZF3 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx49Q4FZF3 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Ddx49Q4FZF3 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.49■□□□□ 0.39
Ddx49Q4FZF3 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.49■□□□□ 0.39
Ddx49Q4FZF3 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx49Q4FZF3 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx49Q4FZF3 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx49Q4FZF3 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Ddx49Q4FZF3 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx49Q4FZF3 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms