Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc27Q3V036 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc27Q3V036 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc27Q3V036 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC19.26■□□□□ 0.67
Ccdc27Q3V036 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc27Q3V036 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ccdc27Q3V036 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc27Q3V036 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC19.26■□□□□ 0.67
Ccdc27Q3V036 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc27Q3V036 Ntrk2-209ENSMUST00000225950 2640 ntBASIC19.26■□□□□ 0.67
Ccdc27Q3V036 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc27Q3V036 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC19.26■□□□□ 0.67
Ccdc27Q3V036 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc27Q3V036 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ccdc27Q3V036 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc27Q3V036 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc27Q3V036 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Ccdc27Q3V036 Gm15372-201ENSMUST00000120729 834 ntBASIC19.26■□□□□ 0.67
Ccdc27Q3V036 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc27Q3V036 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc27Q3V036 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.26■□□□□ 0.67
Ccdc27Q3V036 AC124569.2-201ENSMUST00000225998 818 ntBASIC19.26■□□□□ 0.67
Ccdc27Q3V036 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc27Q3V036 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc27Q3V036 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc27Q3V036 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc27Q3V036 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc27Q3V036 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc27Q3V036 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc27Q3V036 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Ccdc27Q3V036 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc27Q3V036 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc27Q3V036 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc27Q3V036 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Ccdc27Q3V036 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc27Q3V036 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC19.25■□□□□ 0.67
Ccdc27Q3V036 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC19.25■□□□□ 0.67
Ccdc27Q3V036 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc27Q3V036 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc27Q3V036 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc27Q3V036 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ccdc27Q3V036 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc27Q3V036 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc27Q3V036 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc27Q3V036 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc27Q3V036 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc27Q3V036 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc27Q3V036 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc27Q3V036 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc27Q3V036 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc27Q3V036 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc27Q3V036 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc27Q3V036 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc27Q3V036 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc27Q3V036 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ccdc27Q3V036 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC19.24■□□□□ 0.67
Ccdc27Q3V036 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC19.24■□□□□ 0.67
Ccdc27Q3V036 Gm27867-201ENSMUST00000184778 125 ntBASIC19.24■□□□□ 0.67
Ccdc27Q3V036 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.24■□□□□ 0.67
Ccdc27Q3V036 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.24■□□□□ 0.67
Ccdc27Q3V036 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc27Q3V036 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc27Q3V036 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc27Q3V036 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc27Q3V036 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC19.24■□□□□ 0.67
Ccdc27Q3V036 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc27Q3V036 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc27Q3V036 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc27Q3V036 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc27Q3V036 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc27Q3V036 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc27Q3V036 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc27Q3V036 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc27Q3V036 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC19.23■□□□□ 0.67
Ccdc27Q3V036 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ccdc27Q3V036 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Ccdc27Q3V036 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc27Q3V036 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.23■□□□□ 0.67
Ccdc27Q3V036 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC19.23■□□□□ 0.67
Ccdc27Q3V036 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc27Q3V036 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc27Q3V036 Prkcz2-201ENSMUST00000206136 1756 ntBASIC19.23■□□□□ 0.67
Ccdc27Q3V036 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC19.23■□□□□ 0.67
Ccdc27Q3V036 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc27Q3V036 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc27Q3V036 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ccdc27Q3V036 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc27Q3V036 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Ccdc27Q3V036 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc27Q3V036 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc27Q3V036 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ccdc27Q3V036 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc27Q3V036 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc27Q3V036 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC19.22■□□□□ 0.67
Ccdc27Q3V036 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc27Q3V036 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc27Q3V036 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc27Q3V036 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc27Q3V036 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc27Q3V036 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms