Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Znf48Q3US17 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.52□□□□□ -0.41
Znf48Q3US17 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.52□□□□□ -0.41
Znf48Q3US17 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Znf48Q3US17 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Znf48Q3US17 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Znf48Q3US17 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Znf48Q3US17 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Znf48Q3US17 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Znf48Q3US17 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Znf48Q3US17 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Znf48Q3US17 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Znf48Q3US17 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Znf48Q3US17 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.52□□□□□ -0.41
Znf48Q3US17 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Znf48Q3US17 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Znf48Q3US17 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Znf48Q3US17 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Znf48Q3US17 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Znf48Q3US17 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Znf48Q3US17 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Znf48Q3US17 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Znf48Q3US17 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Znf48Q3US17 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.51□□□□□ -0.41
Znf48Q3US17 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Znf48Q3US17 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Znf48Q3US17 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Znf48Q3US17 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Znf48Q3US17 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Znf48Q3US17 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Znf48Q3US17 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Znf48Q3US17 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Znf48Q3US17 Gm10175-201ENSMUST00000086013 645 ntBASIC12.51□□□□□ -0.41
Znf48Q3US17 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Znf48Q3US17 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Znf48Q3US17 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Znf48Q3US17 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Znf48Q3US17 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Znf48Q3US17 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.51□□□□□ -0.41
Znf48Q3US17 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Znf48Q3US17 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Znf48Q3US17 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Znf48Q3US17 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.51□□□□□ -0.41
Znf48Q3US17 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Znf48Q3US17 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Znf48Q3US17 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Znf48Q3US17 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Znf48Q3US17 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.5□□□□□ -0.41
Znf48Q3US17 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Znf48Q3US17 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.5□□□□□ -0.41
Znf48Q3US17 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Znf48Q3US17 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Znf48Q3US17 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Znf48Q3US17 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Znf48Q3US17 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Znf48Q3US17 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Znf48Q3US17 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Znf48Q3US17 Gm7222-201ENSMUST00000117512 906 ntBASIC12.5□□□□□ -0.41
Znf48Q3US17 Gm4459-201ENSMUST00000118750 468 ntBASIC12.5□□□□□ -0.41
Znf48Q3US17 Gm15920-201ENSMUST00000118998 402 ntBASIC12.5□□□□□ -0.41
Znf48Q3US17 Gm11780-201ENSMUST00000136880 516 ntBASIC12.5□□□□□ -0.41
Znf48Q3US17 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.5□□□□□ -0.41
Znf48Q3US17 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.5□□□□□ -0.41
Znf48Q3US17 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.5□□□□□ -0.41
Znf48Q3US17 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Znf48Q3US17 Mir3113-201ENSMUST00000175478 76 ntBASIC12.5□□□□□ -0.41
Znf48Q3US17 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Znf48Q3US17 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.5□□□□□ -0.41
Znf48Q3US17 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Znf48Q3US17 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Znf48Q3US17 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Znf48Q3US17 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Znf48Q3US17 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Znf48Q3US17 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Znf48Q3US17 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Znf48Q3US17 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Znf48Q3US17 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Znf48Q3US17 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Znf48Q3US17 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Znf48Q3US17 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Znf48Q3US17 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Znf48Q3US17 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Znf48Q3US17 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Znf48Q3US17 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Znf48Q3US17 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Znf48Q3US17 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Znf48Q3US17 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Znf48Q3US17 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.49□□□□□ -0.41
Znf48Q3US17 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Znf48Q3US17 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Znf48Q3US17 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Znf48Q3US17 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Znf48Q3US17 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Znf48Q3US17 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Znf48Q3US17 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Znf48Q3US17 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Znf48Q3US17 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Znf48Q3US17 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Znf48Q3US17 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Znf48Q3US17 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms