Protein–RNA interactions for Protein: Q3UHX8

Nkx6-3, Homeobox protein Nkx-6.3, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3Q3UHX8 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Nkx6-3Q3UHX8 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-3Q3UHX8 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-3Q3UHX8 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.21□□□□□ -0.13
Nkx6-3Q3UHX8 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nkx6-3Q3UHX8 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.21□□□□□ -0.13
Nkx6-3Q3UHX8 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nkx6-3Q3UHX8 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nkx6-3Q3UHX8 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nkx6-3Q3UHX8 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Nkx6-3Q3UHX8 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nkx6-3Q3UHX8 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Nkx6-3Q3UHX8 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Nkx6-3Q3UHX8 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-3Q3UHX8 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-3Q3UHX8 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-3Q3UHX8 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-3Q3UHX8 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-3Q3UHX8 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Nkx6-3Q3UHX8 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-3Q3UHX8 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Nkx6-3Q3UHX8 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-3Q3UHX8 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Nkx6-3Q3UHX8 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-3Q3UHX8 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-3Q3UHX8 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Nkx6-3Q3UHX8 Gm11745-201ENSMUST00000121669 448 ntBASIC14.2□□□□□ -0.14
Nkx6-3Q3UHX8 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-3Q3UHX8 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-3Q3UHX8 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.2□□□□□ -0.14
Nkx6-3Q3UHX8 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.2□□□□□ -0.14
Nkx6-3Q3UHX8 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.2□□□□□ -0.14
Nkx6-3Q3UHX8 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.2□□□□□ -0.14
Nkx6-3Q3UHX8 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-3Q3UHX8 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-3Q3UHX8 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-3Q3UHX8 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-3Q3UHX8 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-3Q3UHX8 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Nkx6-3Q3UHX8 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
Nkx6-3Q3UHX8 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Nkx6-3Q3UHX8 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-3Q3UHX8 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Nkx6-3Q3UHX8 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-3Q3UHX8 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-3Q3UHX8 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-3Q3UHX8 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Nkx6-3Q3UHX8 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-3Q3UHX8 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nkx6-3Q3UHX8 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-3Q3UHX8 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-3Q3UHX8 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-3Q3UHX8 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-3Q3UHX8 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-3Q3UHX8 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-3Q3UHX8 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-3Q3UHX8 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-3Q3UHX8 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-3Q3UHX8 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-3Q3UHX8 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.19□□□□□ -0.14
Nkx6-3Q3UHX8 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-3Q3UHX8 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-3Q3UHX8 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-3Q3UHX8 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-3Q3UHX8 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-3Q3UHX8 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-3Q3UHX8 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Nkx6-3Q3UHX8 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-3Q3UHX8 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-3Q3UHX8 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-3Q3UHX8 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-3Q3UHX8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nkx6-3Q3UHX8 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-3Q3UHX8 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-3Q3UHX8 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.19□□□□□ -0.14
Nkx6-3Q3UHX8 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Nkx6-3Q3UHX8 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-3Q3UHX8 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-3Q3UHX8 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-3Q3UHX8 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-3Q3UHX8 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nkx6-3Q3UHX8 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-3Q3UHX8 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-3Q3UHX8 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Nkx6-3Q3UHX8 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-3Q3UHX8 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-3Q3UHX8 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.18□□□□□ -0.14
Nkx6-3Q3UHX8 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-3Q3UHX8 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-3Q3UHX8 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-3Q3UHX8 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-3Q3UHX8 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-3Q3UHX8 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-3Q3UHX8 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.18□□□□□ -0.14
Nkx6-3Q3UHX8 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Nkx6-3Q3UHX8 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.18□□□□□ -0.14
Nkx6-3Q3UHX8 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.18□□□□□ -0.14
Nkx6-3Q3UHX8 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-3Q3UHX8 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nkx6-3Q3UHX8 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms