Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm29787-201ENSMUST00000222129 849 ntBASIC13.77□□□□□ -0.21
Spg11Q3UHA3 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.77□□□□□ -0.21
Spg11Q3UHA3 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Spg11Q3UHA3 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Spg11Q3UHA3 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Spg11Q3UHA3 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.77□□□□□ -0.21
Spg11Q3UHA3 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Spg11Q3UHA3 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Spg11Q3UHA3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Spg11Q3UHA3 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Spg11Q3UHA3 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Spg11Q3UHA3 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Spg11Q3UHA3 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Spg11Q3UHA3 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Spg11Q3UHA3 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Spg11Q3UHA3 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Spg11Q3UHA3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Spg11Q3UHA3 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.76□□□□□ -0.21
Spg11Q3UHA3 Gm5279-201ENSMUST00000199575 745 ntBASIC13.76□□□□□ -0.21
Spg11Q3UHA3 Gm18307-201ENSMUST00000206864 949 ntBASIC13.76□□□□□ -0.21
Spg11Q3UHA3 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Spg11Q3UHA3 Gm9176-201ENSMUST00000219955 1120 ntBASIC13.76□□□□□ -0.21
Spg11Q3UHA3 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.76□□□□□ -0.21
Spg11Q3UHA3 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Spg11Q3UHA3 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Spg11Q3UHA3 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Spg11Q3UHA3 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Spg11Q3UHA3 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Spg11Q3UHA3 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Spg11Q3UHA3 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.76□□□□□ -0.21
Spg11Q3UHA3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Spg11Q3UHA3 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.76□□□□□ -0.21
Spg11Q3UHA3 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Spg11Q3UHA3 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Spg11Q3UHA3 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.76□□□□□ -0.21
Spg11Q3UHA3 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Spg11Q3UHA3 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Spg11Q3UHA3 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Spg11Q3UHA3 Gm10012-201ENSMUST00000078252 192 ntBASIC13.76□□□□□ -0.21
Spg11Q3UHA3 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Spg11Q3UHA3 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Spg11Q3UHA3 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Spg11Q3UHA3 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Spg11Q3UHA3 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Gm14722-201ENSMUST00000118943 689 ntBASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Gm8652-201ENSMUST00000181363 964 ntBASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Gm43118-201ENSMUST00000199149 775 ntBASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Spg11Q3UHA3 AU022133-201ENSMUST00000200601 873 ntBASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Spg11Q3UHA3 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Gm24196-201ENSMUST00000179161 110 ntBASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Gm6091-201ENSMUST00000098307 165 ntBASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Spg11Q3UHA3 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Spg11Q3UHA3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Spg11Q3UHA3 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Spg11Q3UHA3 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.74□□□□□ -0.21
Spg11Q3UHA3 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.74□□□□□ -0.21
Spg11Q3UHA3 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.74□□□□□ -0.21
Spg11Q3UHA3 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Spg11Q3UHA3 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Spg11Q3UHA3 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Spg11Q3UHA3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Spg11Q3UHA3 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Spg11Q3UHA3 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Spg11Q3UHA3 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Spg11Q3UHA3 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC13.74□□□□□ -0.21
Spg11Q3UHA3 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms