Protein–RNA interactions for Protein: Q3U0I6

Smim6, MCG148180, mousemouse

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim6Q3U0I6 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim6Q3U0I6 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim6Q3U0I6 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Smim6Q3U0I6 Gm10313-201ENSMUST00000095320 1002 ntBASIC11.72□□□□□ -0.53
Smim6Q3U0I6 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Smim6Q3U0I6 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim6Q3U0I6 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim6Q3U0I6 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Smim6Q3U0I6 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim6Q3U0I6 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smim6Q3U0I6 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Smim6Q3U0I6 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.72□□□□□ -0.53
Smim6Q3U0I6 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC11.72□□□□□ -0.53
Smim6Q3U0I6 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim6Q3U0I6 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smim6Q3U0I6 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smim6Q3U0I6 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smim6Q3U0I6 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smim6Q3U0I6 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Smim6Q3U0I6 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smim6Q3U0I6 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Smim6Q3U0I6 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smim6Q3U0I6 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Smim6Q3U0I6 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smim6Q3U0I6 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smim6Q3U0I6 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smim6Q3U0I6 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Smim6Q3U0I6 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC11.71□□□□□ -0.53
Smim6Q3U0I6 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.71□□□□□ -0.53
Smim6Q3U0I6 Gm25406-201ENSMUST00000157599 105 ntBASIC11.71□□□□□ -0.53
Smim6Q3U0I6 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smim6Q3U0I6 Gm7286-201ENSMUST00000182691 1007 ntBASIC11.71□□□□□ -0.53
Smim6Q3U0I6 Gm2274-201ENSMUST00000184539 609 ntBASIC11.71□□□□□ -0.53
Smim6Q3U0I6 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smim6Q3U0I6 Gm10602-201ENSMUST00000098239 609 ntBASIC11.71□□□□□ -0.53
Smim6Q3U0I6 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smim6Q3U0I6 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smim6Q3U0I6 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smim6Q3U0I6 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smim6Q3U0I6 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Smim6Q3U0I6 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Smim6Q3U0I6 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smim6Q3U0I6 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smim6Q3U0I6 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Smim6Q3U0I6 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smim6Q3U0I6 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smim6Q3U0I6 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Smim6Q3U0I6 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smim6Q3U0I6 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smim6Q3U0I6 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smim6Q3U0I6 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC11.7□□□□□ -0.54
Smim6Q3U0I6 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smim6Q3U0I6 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smim6Q3U0I6 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smim6Q3U0I6 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smim6Q3U0I6 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smim6Q3U0I6 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smim6Q3U0I6 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smim6Q3U0I6 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smim6Q3U0I6 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smim6Q3U0I6 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Smim6Q3U0I6 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Smim6Q3U0I6 Gm4217-201ENSMUST00000182243 1002 ntBASIC11.7□□□□□ -0.54
Smim6Q3U0I6 Gm21814-202ENSMUST00000203277 873 ntBASIC11.7□□□□□ -0.54
Smim6Q3U0I6 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Smim6Q3U0I6 Gm18041-201ENSMUST00000218210 618 ntBASIC11.7□□□□□ -0.54
Smim6Q3U0I6 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smim6Q3U0I6 Gm9987-201ENSMUST00000069768 567 ntBASIC11.7□□□□□ -0.54
Smim6Q3U0I6 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC11.7□□□□□ -0.54
Smim6Q3U0I6 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smim6Q3U0I6 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Smim6Q3U0I6 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Smim6Q3U0I6 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smim6Q3U0I6 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smim6Q3U0I6 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smim6Q3U0I6 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Smim6Q3U0I6 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smim6Q3U0I6 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Smim6Q3U0I6 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smim6Q3U0I6 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.7□□□□□ -0.54
Smim6Q3U0I6 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC11.7□□□□□ -0.54
Smim6Q3U0I6 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Smim6Q3U0I6 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Smim6Q3U0I6 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smim6Q3U0I6 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.69□□□□□ -0.54
Smim6Q3U0I6 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smim6Q3U0I6 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smim6Q3U0I6 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smim6Q3U0I6 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smim6Q3U0I6 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Smim6Q3U0I6 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smim6Q3U0I6 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smim6Q3U0I6 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.69□□□□□ -0.54
Smim6Q3U0I6 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smim6Q3U0I6 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smim6Q3U0I6 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Smim6Q3U0I6 Gm37856-201ENSMUST00000191634 999 ntBASIC11.69□□□□□ -0.54
Smim6Q3U0I6 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smim6Q3U0I6 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Smim6Q3U0I6 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms