Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Q3KNL4 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Q3KNL4 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Q3KNL4 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Q3KNL4 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Q3KNL4 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Q3KNL4 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Q3KNL4 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Q3KNL4 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Q3KNL4 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Q3KNL4 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Q3KNL4 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Q3KNL4 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Q3KNL4 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Q3KNL4 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Q3KNL4 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Q3KNL4 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Q3KNL4 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.83□□□□□ -0.04
Q3KNL4 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Q3KNL4 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Q3KNL4 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Q3KNL4 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Q3KNL4 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Q3KNL4 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Q3KNL4 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Q3KNL4 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Q3KNL4 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Q3KNL4 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Q3KNL4 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Q3KNL4 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Q3KNL4 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.83□□□□□ -0.04
Q3KNL4 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Q3KNL4 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Q3KNL4 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Q3KNL4 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Q3KNL4 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Q3KNL4 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.82□□□□□ -0.04
Q3KNL4 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Q3KNL4 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Q3KNL4 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Q3KNL4 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.82□□□□□ -0.04
Q3KNL4 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Q3KNL4 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Q3KNL4 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Q3KNL4 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Q3KNL4 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Q3KNL4 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Q3KNL4 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Q3KNL4 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.82□□□□□ -0.04
Q3KNL4 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.82□□□□□ -0.04
Q3KNL4 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.82□□□□□ -0.04
Q3KNL4 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Q3KNL4 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Q3KNL4 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.82□□□□□ -0.04
Q3KNL4 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Q3KNL4 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Q3KNL4 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Q3KNL4 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Q3KNL4 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Q3KNL4 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Q3KNL4 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Q3KNL4 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Q3KNL4 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Q3KNL4 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Q3KNL4 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Q3KNL4 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.82□□□□□ -0.04
Q3KNL4 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Q3KNL4 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.82□□□□□ -0.04
Q3KNL4 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Q3KNL4 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Q3KNL4 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Q3KNL4 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Q3KNL4 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Q3KNL4 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Q3KNL4 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.81□□□□□ -0.04
Q3KNL4 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Q3KNL4 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Q3KNL4 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Q3KNL4 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Q3KNL4 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Q3KNL4 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.81□□□□□ -0.04
Q3KNL4 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Q3KNL4 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Q3KNL4 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.81□□□□□ -0.04
Q3KNL4 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Q3KNL4 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.81□□□□□ -0.04
Q3KNL4 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Q3KNL4 Gm17807-201ENSMUST00000186869 298 ntBASIC14.81□□□□□ -0.04
Q3KNL4 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.81□□□□□ -0.04
Q3KNL4 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.81□□□□□ -0.04
Q3KNL4 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Q3KNL4 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Q3KNL4 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Q3KNL4 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Q3KNL4 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Q3KNL4 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.81□□□□□ -0.04
Q3KNL4 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Q3KNL4 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Q3KNL4 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.81□□□□□ -0.04
Q3KNL4 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms