Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim63Q38HM4 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trim63Q38HM4 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim63Q38HM4 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim63Q38HM4 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim63Q38HM4 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.46□□□□□ -0.41
Trim63Q38HM4 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim63Q38HM4 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim63Q38HM4 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trim63Q38HM4 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trim63Q38HM4 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trim63Q38HM4 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC12.46□□□□□ -0.41
Trim63Q38HM4 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim63Q38HM4 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim63Q38HM4 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC12.46□□□□□ -0.41
Trim63Q38HM4 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim63Q38HM4 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim63Q38HM4 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trim63Q38HM4 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim63Q38HM4 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim63Q38HM4 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.46□□□□□ -0.42
Trim63Q38HM4 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim63Q38HM4 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Trim63Q38HM4 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim63Q38HM4 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trim63Q38HM4 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim63Q38HM4 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim63Q38HM4 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trim63Q38HM4 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim63Q38HM4 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim63Q38HM4 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim63Q38HM4 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim63Q38HM4 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim63Q38HM4 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim63Q38HM4 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim63Q38HM4 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim63Q38HM4 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.45□□□□□ -0.42
Trim63Q38HM4 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim63Q38HM4 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim63Q38HM4 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim63Q38HM4 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim63Q38HM4 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trim63Q38HM4 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim63Q38HM4 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.45□□□□□ -0.42
Trim63Q38HM4 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim63Q38HM4 Gm26833-201ENSMUST00000180899 440 ntBASIC12.45□□□□□ -0.42
Trim63Q38HM4 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim63Q38HM4 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim63Q38HM4 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trim63Q38HM4 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim63Q38HM4 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim63Q38HM4 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim63Q38HM4 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim63Q38HM4 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim63Q38HM4 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim63Q38HM4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim63Q38HM4 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim63Q38HM4 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim63Q38HM4 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim63Q38HM4 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.45□□□□□ -0.42
Trim63Q38HM4 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim63Q38HM4 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Trim63Q38HM4 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trim63Q38HM4 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim63Q38HM4 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim63Q38HM4 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim63Q38HM4 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.45□□□□□ -0.42
Trim63Q38HM4 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim63Q38HM4 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim63Q38HM4 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim63Q38HM4 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim63Q38HM4 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim63Q38HM4 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trim63Q38HM4 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trim63Q38HM4 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim63Q38HM4 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim63Q38HM4 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim63Q38HM4 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC12.44□□□□□ -0.42
Trim63Q38HM4 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim63Q38HM4 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim63Q38HM4 Gm9988-201ENSMUST00000069786 435 ntBASIC12.44□□□□□ -0.42
Trim63Q38HM4 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim63Q38HM4 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim63Q38HM4 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim63Q38HM4 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trim63Q38HM4 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim63Q38HM4 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim63Q38HM4 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim63Q38HM4 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim63Q38HM4 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.44□□□□□ -0.42
Trim63Q38HM4 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim63Q38HM4 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim63Q38HM4 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim63Q38HM4 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim63Q38HM4 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trim63Q38HM4 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim63Q38HM4 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim63Q38HM4 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Trim63Q38HM4 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim63Q38HM4 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms