Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tff1Q08423 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tff1Q08423 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tff1Q08423 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tff1Q08423 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tff1Q08423 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.55□□□□□ -0.4
Tff1Q08423 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tff1Q08423 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tff1Q08423 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Tff1Q08423 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tff1Q08423 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tff1Q08423 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tff1Q08423 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tff1Q08423 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tff1Q08423 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tff1Q08423 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tff1Q08423 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tff1Q08423 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Tff1Q08423 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tff1Q08423 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tff1Q08423 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.54□□□□□ -0.4
Tff1Q08423 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.54□□□□□ -0.4
Tff1Q08423 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tff1Q08423 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tff1Q08423 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.54□□□□□ -0.4
Tff1Q08423 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.54□□□□□ -0.4
Tff1Q08423 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tff1Q08423 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.54□□□□□ -0.4
Tff1Q08423 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.54□□□□□ -0.4
Tff1Q08423 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tff1Q08423 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.54□□□□□ -0.4
Tff1Q08423 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tff1Q08423 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Tff1Q08423 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tff1Q08423 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tff1Q08423 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tff1Q08423 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tff1Q08423 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.54□□□□□ -0.4
Tff1Q08423 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tff1Q08423 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tff1Q08423 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tff1Q08423 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tff1Q08423 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Tff1Q08423 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tff1Q08423 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tff1Q08423 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tff1Q08423 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Tff1Q08423 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tff1Q08423 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tff1Q08423 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tff1Q08423 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Tff1Q08423 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tff1Q08423 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tff1Q08423 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Tff1Q08423 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tff1Q08423 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Tff1Q08423 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tff1Q08423 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tff1Q08423 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Tff1Q08423 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tff1Q08423 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tff1Q08423 Rprl3-201ENSMUST00000157400 290 ntBASIC12.53□□□□□ -0.4
Tff1Q08423 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.53□□□□□ -0.4
Tff1Q08423 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.53□□□□□ -0.4
Tff1Q08423 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.53□□□□□ -0.4
Tff1Q08423 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tff1Q08423 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tff1Q08423 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tff1Q08423 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Tff1Q08423 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tff1Q08423 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tff1Q08423 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tff1Q08423 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.53□□□□□ -0.4
Tff1Q08423 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tff1Q08423 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tff1Q08423 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tff1Q08423 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tff1Q08423 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tff1Q08423 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Tff1Q08423 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Tff1Q08423 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tff1Q08423 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tff1Q08423 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tff1Q08423 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tff1Q08423 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tff1Q08423 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tff1Q08423 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Tff1Q08423 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.52□□□□□ -0.41
Tff1Q08423 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tff1Q08423 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Tff1Q08423 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.52□□□□□ -0.41
Tff1Q08423 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.52□□□□□ -0.41
Tff1Q08423 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.52□□□□□ -0.41
Tff1Q08423 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC12.52□□□□□ -0.41
Tff1Q08423 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Tff1Q08423 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tff1Q08423 Gm27867-201ENSMUST00000184778 125 ntBASIC12.52□□□□□ -0.41
Tff1Q08423 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Tff1Q08423 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.52□□□□□ -0.41
Tff1Q08423 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms