Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Sox4Q06831 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sox4Q06831 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox4Q06831 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Sox4Q06831 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox4Q06831 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
Sox4Q06831 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox4Q06831 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Sox4Q06831 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox4Q06831 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox4Q06831 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox4Q06831 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox4Q06831 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sox4Q06831 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.81□□□□□ -0.04
Sox4Q06831 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox4Q06831 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox4Q06831 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Sox4Q06831 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox4Q06831 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
Sox4Q06831 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.81□□□□□ -0.04
Sox4Q06831 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sox4Q06831 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.81□□□□□ -0.04
Sox4Q06831 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.81□□□□□ -0.04
Sox4Q06831 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.81□□□□□ -0.04
Sox4Q06831 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox4Q06831 Gm25911-201ENSMUST00000157621 56 ntBASIC14.81□□□□□ -0.04
Sox4Q06831 Gm17271-201ENSMUST00000165535 355 ntBASIC14.81□□□□□ -0.04
Sox4Q06831 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.81□□□□□ -0.04
Sox4Q06831 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.81□□□□□ -0.04
Sox4Q06831 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.81□□□□□ -0.04
Sox4Q06831 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox4Q06831 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox4Q06831 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox4Q06831 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox4Q06831 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox4Q06831 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sox4Q06831 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sox4Q06831 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox4Q06831 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sox4Q06831 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox4Q06831 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox4Q06831 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sox4Q06831 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox4Q06831 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.81□□□□□ -0.04
Sox4Q06831 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sox4Q06831 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Sox4Q06831 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sox4Q06831 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox4Q06831 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Sox4Q06831 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox4Q06831 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.8□□□□□ -0.04
Sox4Q06831 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sox4Q06831 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Sox4Q06831 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox4Q06831 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox4Q06831 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.8□□□□□ -0.04
Sox4Q06831 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sox4Q06831 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox4Q06831 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox4Q06831 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox4Q06831 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Sox4Q06831 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox4Q06831 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.8□□□□□ -0.04
Sox4Q06831 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sox4Q06831 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.8□□□□□ -0.04
Sox4Q06831 Gm16198-201ENSMUST00000118766 670 ntBASIC14.8□□□□□ -0.04
Sox4Q06831 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.8□□□□□ -0.04
Sox4Q06831 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.8□□□□□ -0.04
Sox4Q06831 Gm2213-201ENSMUST00000197485 688 ntBASIC14.8□□□□□ -0.04
Sox4Q06831 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sox4Q06831 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.8□□□□□ -0.04
Sox4Q06831 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.8□□□□□ -0.04
Sox4Q06831 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox4Q06831 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sox4Q06831 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Sox4Q06831 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox4Q06831 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox4Q06831 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.8□□□□□ -0.04
Sox4Q06831 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Sox4Q06831 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox4Q06831 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Sox4Q06831 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox4Q06831 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox4Q06831 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Sox4Q06831 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Sox4Q06831 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox4Q06831 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox4Q06831 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.79□□□□□ -0.04
Sox4Q06831 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox4Q06831 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.79□□□□□ -0.04
Sox4Q06831 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sox4Q06831 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox4Q06831 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.79□□□□□ -0.04
Sox4Q06831 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Sox4Q06831 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.79□□□□□ -0.04
Sox4Q06831 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.79□□□□□ -0.04
Sox4Q06831 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sox4Q06831 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.79□□□□□ -0.04
Sox4Q06831 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.79□□□□□ -0.04
Sox4Q06831 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms