Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Smarcc1P97496 Gm5357-201ENSMUST00000212720 1924 ntBASIC18.78■□□□□ 0.6
Smarcc1P97496 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcc1P97496 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcc1P97496 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcc1P97496 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcc1P97496 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcc1P97496 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcc1P97496 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcc1P97496 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcc1P97496 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Smarcc1P97496 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcc1P97496 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcc1P97496 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC18.77■□□□□ 0.6
Smarcc1P97496 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC18.77■□□□□ 0.6
Smarcc1P97496 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC18.77■□□□□ 0.6
Smarcc1P97496 AC238811.1-201ENSMUST00000225302 441 ntBASIC18.77■□□□□ 0.6
Smarcc1P97496 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcc1P97496 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcc1P97496 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcc1P97496 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Smarcc1P97496 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcc1P97496 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcc1P97496 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Smarcc1P97496 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcc1P97496 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcc1P97496 Gm28631-201ENSMUST00000190740 334 ntBASIC18.76■□□□□ 0.59
Smarcc1P97496 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcc1P97496 AC154239.3-201ENSMUST00000226933 674 ntBASIC18.76■□□□□ 0.59
Smarcc1P97496 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcc1P97496 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcc1P97496 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.76■□□□□ 0.59
Smarcc1P97496 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Smarcc1P97496 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcc1P97496 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smarcc1P97496 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.76■□□□□ 0.59
Smarcc1P97496 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcc1P97496 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcc1P97496 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.75■□□□□ 0.59
Smarcc1P97496 Gm6756-201ENSMUST00000180647 1620 ntBASIC18.75■□□□□ 0.59
Smarcc1P97496 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcc1P97496 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcc1P97496 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcc1P97496 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcc1P97496 Gm6745-201ENSMUST00000199216 526 ntBASIC18.75■□□□□ 0.59
Smarcc1P97496 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcc1P97496 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcc1P97496 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcc1P97496 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcc1P97496 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC18.75■□□□□ 0.59
Smarcc1P97496 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC18.75■□□□□ 0.59
Smarcc1P97496 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcc1P97496 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcc1P97496 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcc1P97496 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Smarcc1P97496 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Smarcc1P97496 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Smarcc1P97496 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcc1P97496 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smarcc1P97496 Gm6263-201ENSMUST00000120029 1342 ntBASIC18.74■□□□□ 0.59
Smarcc1P97496 Asic1-205ENSMUST00000228185 1818 ntBASIC18.74■□□□□ 0.59
Smarcc1P97496 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcc1P97496 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcc1P97496 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcc1P97496 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcc1P97496 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcc1P97496 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcc1P97496 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcc1P97496 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcc1P97496 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcc1P97496 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.74■□□□□ 0.59
Smarcc1P97496 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcc1P97496 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Smarcc1P97496 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcc1P97496 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC18.74■□□□□ 0.59
Smarcc1P97496 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Smarcc1P97496 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC18.74■□□□□ 0.59
Smarcc1P97496 Gm23984-201ENSMUST00000157139 203 ntBASIC18.74■□□□□ 0.59
Smarcc1P97496 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcc1P97496 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcc1P97496 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC18.74■□□□□ 0.59
Smarcc1P97496 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC18.74■□□□□ 0.59
Smarcc1P97496 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcc1P97496 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcc1P97496 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcc1P97496 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcc1P97496 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcc1P97496 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcc1P97496 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcc1P97496 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarcc1P97496 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Smarcc1P97496 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcc1P97496 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcc1P97496 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcc1P97496 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcc1P97496 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcc1P97496 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarcc1P97496 Mir1897-201ENSMUST00000122581 272 ntBASIC18.73■□□□□ 0.59
Smarcc1P97496 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC18.73■□□□□ 0.59
Smarcc1P97496 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms