Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim43cP86449 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim43cP86449 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trim43cP86449 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trim43cP86449 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim43cP86449 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim43cP86449 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim43cP86449 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim43cP86449 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim43cP86449 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim43cP86449 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim43cP86449 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trim43cP86449 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Trim43cP86449 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim43cP86449 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim43cP86449 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim43cP86449 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC16.38■□□□□ 0.21
Trim43cP86449 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim43cP86449 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim43cP86449 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trim43cP86449 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim43cP86449 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trim43cP86449 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim43cP86449 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim43cP86449 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.38■□□□□ 0.21
Trim43cP86449 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.38■□□□□ 0.21
Trim43cP86449 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim43cP86449 Gm14140-201ENSMUST00000119999 995 ntBASIC16.38■□□□□ 0.21
Trim43cP86449 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim43cP86449 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.38■□□□□ 0.21
Trim43cP86449 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim43cP86449 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.38■□□□□ 0.21
Trim43cP86449 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim43cP86449 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.38■□□□□ 0.21
Trim43cP86449 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim43cP86449 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim43cP86449 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Trim43cP86449 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim43cP86449 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim43cP86449 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim43cP86449 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim43cP86449 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim43cP86449 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim43cP86449 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim43cP86449 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim43cP86449 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim43cP86449 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim43cP86449 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.37■□□□□ 0.21
Trim43cP86449 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim43cP86449 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim43cP86449 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Trim43cP86449 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim43cP86449 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim43cP86449 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim43cP86449 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
Trim43cP86449 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.37■□□□□ 0.21
Trim43cP86449 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim43cP86449 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.37■□□□□ 0.21
Trim43cP86449 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.37■□□□□ 0.21
Trim43cP86449 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim43cP86449 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trim43cP86449 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim43cP86449 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim43cP86449 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim43cP86449 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim43cP86449 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trim43cP86449 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim43cP86449 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim43cP86449 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim43cP86449 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim43cP86449 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim43cP86449 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.37■□□□□ 0.21
Trim43cP86449 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim43cP86449 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim43cP86449 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim43cP86449 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim43cP86449 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Trim43cP86449 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim43cP86449 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trim43cP86449 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim43cP86449 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim43cP86449 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim43cP86449 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim43cP86449 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.36■□□□□ 0.21
Trim43cP86449 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.36■□□□□ 0.21
Trim43cP86449 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Trim43cP86449 Gm12008-201ENSMUST00000117791 755 ntBASIC16.36■□□□□ 0.21
Trim43cP86449 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.36■□□□□ 0.21
Trim43cP86449 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Trim43cP86449 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim43cP86449 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim43cP86449 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.36■□□□□ 0.21
Trim43cP86449 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.36■□□□□ 0.21
Trim43cP86449 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim43cP86449 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.36■□□□□ 0.21
Trim43cP86449 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim43cP86449 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim43cP86449 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim43cP86449 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim43cP86449 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms