Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcaP82350 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcaP82350 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SgcaP82350 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SgcaP82350 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC12.67□□□□□ -0.38
SgcaP82350 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.67□□□□□ -0.38
SgcaP82350 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcaP82350 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcaP82350 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
SgcaP82350 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SgcaP82350 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcaP82350 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.67□□□□□ -0.38
SgcaP82350 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.67□□□□□ -0.38
SgcaP82350 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
SgcaP82350 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SgcaP82350 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcaP82350 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
SgcaP82350 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcaP82350 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.67□□□□□ -0.38
SgcaP82350 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcaP82350 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SgcaP82350 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcaP82350 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcaP82350 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcaP82350 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
SgcaP82350 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.67□□□□□ -0.38
SgcaP82350 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcaP82350 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcaP82350 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SgcaP82350 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcaP82350 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcaP82350 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcaP82350 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SgcaP82350 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SgcaP82350 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcaP82350 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcaP82350 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SgcaP82350 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
SgcaP82350 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcaP82350 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.66□□□□□ -0.38
SgcaP82350 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SgcaP82350 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcaP82350 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SgcaP82350 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcaP82350 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC12.66□□□□□ -0.38
SgcaP82350 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SgcaP82350 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SgcaP82350 Mir6404-201ENSMUST00000183699 94 ntBASIC12.66□□□□□ -0.38
SgcaP82350 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SgcaP82350 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.66□□□□□ -0.38
SgcaP82350 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcaP82350 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SgcaP82350 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcaP82350 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SgcaP82350 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SgcaP82350 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SgcaP82350 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.66□□□□□ -0.38
SgcaP82350 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcaP82350 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcaP82350 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcaP82350 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SgcaP82350 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcaP82350 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.66□□□□□ -0.38
SgcaP82350 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
SgcaP82350 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SgcaP82350 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcaP82350 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SgcaP82350 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcaP82350 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcaP82350 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.65□□□□□ -0.38
SgcaP82350 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcaP82350 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcaP82350 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcaP82350 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcaP82350 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.65□□□□□ -0.38
SgcaP82350 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcaP82350 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcaP82350 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.65□□□□□ -0.38
SgcaP82350 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcaP82350 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcaP82350 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcaP82350 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcaP82350 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SgcaP82350 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcaP82350 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcaP82350 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SgcaP82350 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC12.65□□□□□ -0.38
SgcaP82350 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcaP82350 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SgcaP82350 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
SgcaP82350 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC12.65□□□□□ -0.38
SgcaP82350 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.65□□□□□ -0.38
SgcaP82350 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
SgcaP82350 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcaP82350 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcaP82350 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcaP82350 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SgcaP82350 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SgcaP82350 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcaP82350 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms