Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Hmgb1P63158 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hmgb1P63158 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hmgb1P63158 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hmgb1P63158 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hmgb1P63158 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.59■□□□□ 0.25
Hmgb1P63158 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hmgb1P63158 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hmgb1P63158 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hmgb1P63158 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hmgb1P63158 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Hmgb1P63158 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.59■□□□□ 0.25
Hmgb1P63158 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hmgb1P63158 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Hmgb1P63158 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hmgb1P63158 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hmgb1P63158 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Hmgb1P63158 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.59■□□□□ 0.25
Hmgb1P63158 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hmgb1P63158 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.59■□□□□ 0.25
Hmgb1P63158 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hmgb1P63158 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Hmgb1P63158 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Hmgb1P63158 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Hmgb1P63158 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Hmgb1P63158 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Hmgb1P63158 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Hmgb1P63158 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Hmgb1P63158 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hmgb1P63158 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.58■□□□□ 0.24
Hmgb1P63158 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Hmgb1P63158 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Hmgb1P63158 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Hmgb1P63158 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hmgb1P63158 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hmgb1P63158 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Hmgb1P63158 Gm18489-201ENSMUST00000172565 551 ntBASIC16.58■□□□□ 0.24
Hmgb1P63158 Gm10499-201ENSMUST00000174094 934 ntBASIC16.58■□□□□ 0.24
Hmgb1P63158 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.58■□□□□ 0.24
Hmgb1P63158 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.58■□□□□ 0.24
Hmgb1P63158 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.58■□□□□ 0.24
Hmgb1P63158 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.58■□□□□ 0.24
Hmgb1P63158 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hmgb1P63158 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hmgb1P63158 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hmgb1P63158 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.58■□□□□ 0.24
Hmgb1P63158 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.58■□□□□ 0.24
Hmgb1P63158 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hmgb1P63158 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Hmgb1P63158 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hmgb1P63158 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Hmgb1P63158 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hmgb1P63158 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hmgb1P63158 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Hmgb1P63158 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Hmgb1P63158 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.58■□□□□ 0.24
Hmgb1P63158 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hmgb1P63158 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hmgb1P63158 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hmgb1P63158 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.57■□□□□ 0.24
Hmgb1P63158 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hmgb1P63158 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hmgb1P63158 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hmgb1P63158 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hmgb1P63158 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hmgb1P63158 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hmgb1P63158 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Hmgb1P63158 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hmgb1P63158 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hmgb1P63158 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.57■□□□□ 0.24
Hmgb1P63158 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hmgb1P63158 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Hmgb1P63158 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC16.57■□□□□ 0.24
Hmgb1P63158 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hmgb1P63158 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hmgb1P63158 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hmgb1P63158 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hmgb1P63158 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hmgb1P63158 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.57■□□□□ 0.24
Hmgb1P63158 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hmgb1P63158 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Hmgb1P63158 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgb1P63158 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgb1P63158 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgb1P63158 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgb1P63158 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.56■□□□□ 0.24
Hmgb1P63158 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
Hmgb1P63158 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgb1P63158 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgb1P63158 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.56■□□□□ 0.24
Hmgb1P63158 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgb1P63158 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgb1P63158 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgb1P63158 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.56■□□□□ 0.24
Hmgb1P63158 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.56■□□□□ 0.24
Hmgb1P63158 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Hmgb1P63158 Gm28033-201ENSMUST00000184224 96 ntBASIC16.56■□□□□ 0.24
Hmgb1P63158 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.56■□□□□ 0.24
Hmgb1P63158 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.56■□□□□ 0.24
Hmgb1P63158 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms