Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ThraP63058 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.29■□□□□ 0.04
ThraP63058 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ThraP63058 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
ThraP63058 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ThraP63058 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ThraP63058 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
ThraP63058 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ThraP63058 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.29■□□□□ 0.04
ThraP63058 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ThraP63058 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ThraP63058 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ThraP63058 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ThraP63058 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ThraP63058 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ThraP63058 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ThraP63058 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ThraP63058 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ThraP63058 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ThraP63058 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ThraP63058 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ThraP63058 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ThraP63058 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ThraP63058 Gm6736-201ENSMUST00000166583 948 ntBASIC15.28■□□□□ 0.04
ThraP63058 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.28■□□□□ 0.04
ThraP63058 Gm27646-201ENSMUST00000183989 110 ntBASIC15.28■□□□□ 0.04
ThraP63058 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.28■□□□□ 0.04
ThraP63058 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.28■□□□□ 0.04
ThraP63058 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ThraP63058 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ThraP63058 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ThraP63058 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ThraP63058 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.28■□□□□ 0.04
ThraP63058 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
ThraP63058 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.28■□□□□ 0.04
ThraP63058 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ThraP63058 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
ThraP63058 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ThraP63058 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ThraP63058 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
ThraP63058 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.27■□□□□ 0.04
ThraP63058 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
ThraP63058 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ThraP63058 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
ThraP63058 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.27■□□□□ 0.04
ThraP63058 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ThraP63058 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
ThraP63058 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ThraP63058 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ThraP63058 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.27■□□□□ 0.04
ThraP63058 Gm11764-201ENSMUST00000120221 623 ntBASIC15.27■□□□□ 0.04
ThraP63058 Gm2756-201ENSMUST00000195851 400 ntBASIC15.27■□□□□ 0.04
ThraP63058 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.27■□□□□ 0.04
ThraP63058 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.27■□□□□ 0.04
ThraP63058 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ThraP63058 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ThraP63058 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ThraP63058 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.27■□□□□ 0.03
ThraP63058 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ThraP63058 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ThraP63058 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ThraP63058 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
ThraP63058 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
ThraP63058 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ThraP63058 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ThraP63058 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ThraP63058 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ThraP63058 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
ThraP63058 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
ThraP63058 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ThraP63058 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
ThraP63058 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ThraP63058 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ThraP63058 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
ThraP63058 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ThraP63058 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ThraP63058 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ThraP63058 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ThraP63058 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ThraP63058 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ThraP63058 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ThraP63058 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.26■□□□□ 0.03
ThraP63058 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ThraP63058 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ThraP63058 Gm4995-201ENSMUST00000117247 432 ntBASIC15.26■□□□□ 0.03
ThraP63058 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
ThraP63058 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
ThraP63058 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ThraP63058 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
ThraP63058 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ThraP63058 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.26■□□□□ 0.03
ThraP63058 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ThraP63058 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ThraP63058 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.26■□□□□ 0.03
ThraP63058 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ThraP63058 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ThraP63058 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ThraP63058 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ThraP63058 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ThraP63058 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms