Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ybx1P62960 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ybx1P62960 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ybx1P62960 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ybx1P62960 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ybx1P62960 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Ybx1P62960 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.43■□□□□ 0.06
Ybx1P62960 Gm6415-201ENSMUST00000118488 348 ntBASIC15.43■□□□□ 0.06
Ybx1P62960 Gm2810-201ENSMUST00000118681 990 ntBASIC15.43■□□□□ 0.06
Ybx1P62960 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.43■□□□□ 0.06
Ybx1P62960 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.43■□□□□ 0.06
Ybx1P62960 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Ybx1P62960 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.43■□□□□ 0.06
Ybx1P62960 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.43■□□□□ 0.06
Ybx1P62960 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ybx1P62960 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ybx1P62960 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Ybx1P62960 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ybx1P62960 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ybx1P62960 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ybx1P62960 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ybx1P62960 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ybx1P62960 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ybx1P62960 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ybx1P62960 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ybx1P62960 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ybx1P62960 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ybx1P62960 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ybx1P62960 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ybx1P62960 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Ybx1P62960 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ybx1P62960 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ybx1P62960 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ybx1P62960 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Ybx1P62960 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Ybx1P62960 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.42■□□□□ 0.06
Ybx1P62960 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.42■□□□□ 0.06
Ybx1P62960 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.42■□□□□ 0.06
Ybx1P62960 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.42■□□□□ 0.06
Ybx1P62960 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ybx1P62960 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Ybx1P62960 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ybx1P62960 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ybx1P62960 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Ybx1P62960 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ybx1P62960 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ybx1P62960 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ybx1P62960 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ybx1P62960 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.41■□□□□ 0.06
Ybx1P62960 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ybx1P62960 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.41■□□□□ 0.06
Ybx1P62960 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ybx1P62960 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Ybx1P62960 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ybx1P62960 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ybx1P62960 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ybx1P62960 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ybx1P62960 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Ybx1P62960 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.41■□□□□ 0.06
Ybx1P62960 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ybx1P62960 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Ybx1P62960 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ybx1P62960 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ybx1P62960 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Ybx1P62960 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.41■□□□□ 0.06
Ybx1P62960 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ybx1P62960 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ybx1P62960 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ybx1P62960 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ybx1P62960 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.41■□□□□ 0.06
Ybx1P62960 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ybx1P62960 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ybx1P62960 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ybx1P62960 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ybx1P62960 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
Ybx1P62960 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ybx1P62960 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Ybx1P62960 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ybx1P62960 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ybx1P62960 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ybx1P62960 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ybx1P62960 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ybx1P62960 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Ybx1P62960 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ybx1P62960 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ybx1P62960 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ybx1P62960 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ybx1P62960 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ybx1P62960 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Ybx1P62960 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Ybx1P62960 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ybx1P62960 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ybx1P62960 Mir6977-201ENSMUST00000184960 64 ntBASIC15.4■□□□□ 0.06
Ybx1P62960 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.4■□□□□ 0.06
Ybx1P62960 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ybx1P62960 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ybx1P62960 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ybx1P62960 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.4■□□□□ 0.06
Ybx1P62960 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ybx1P62960 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms