Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrch1P62046 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrch1P62046 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrch1P62046 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrch1P62046 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrch1P62046 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrch1P62046 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.68■□□□□ 0.42
Lrch1P62046 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lrch1P62046 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrch1P62046 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrch1P62046 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrch1P62046 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrch1P62046 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrch1P62046 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrch1P62046 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrch1P62046 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lrch1P62046 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrch1P62046 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Lrch1P62046 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrch1P62046 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lrch1P62046 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrch1P62046 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrch1P62046 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lrch1P62046 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Lrch1P62046 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lrch1P62046 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Lrch1P62046 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lrch1P62046 Gm9522-201ENSMUST00000182394 926 ntBASIC17.67■□□□□ 0.42
Lrch1P62046 Mir6420-201ENSMUST00000185032 102 ntBASIC17.67■□□□□ 0.42
Lrch1P62046 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lrch1P62046 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC17.67■□□□□ 0.42
Lrch1P62046 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrch1P62046 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrch1P62046 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrch1P62046 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Lrch1P62046 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Lrch1P62046 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrch1P62046 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrch1P62046 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lrch1P62046 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrch1P62046 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
Lrch1P62046 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lrch1P62046 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lrch1P62046 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrch1P62046 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrch1P62046 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrch1P62046 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lrch1P62046 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lrch1P62046 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lrch1P62046 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lrch1P62046 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.66■□□□□ 0.42
Lrch1P62046 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lrch1P62046 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lrch1P62046 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lrch1P62046 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC17.66■□□□□ 0.42
Lrch1P62046 Dupd1-202ENSMUST00000224735 548 ntBASIC17.66■□□□□ 0.42
Lrch1P62046 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Lrch1P62046 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.66■□□□□ 0.42
Lrch1P62046 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lrch1P62046 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lrch1P62046 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lrch1P62046 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Lrch1P62046 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lrch1P62046 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Lrch1P62046 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrch1P62046 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Lrch1P62046 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrch1P62046 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lrch1P62046 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrch1P62046 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrch1P62046 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrch1P62046 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrch1P62046 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrch1P62046 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC17.65■□□□□ 0.42
Lrch1P62046 Gm18624-201ENSMUST00000220966 658 ntBASIC17.65■□□□□ 0.42
Lrch1P62046 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrch1P62046 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrch1P62046 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrch1P62046 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrch1P62046 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Lrch1P62046 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrch1P62046 Gm8131-201ENSMUST00000213783 1570 ntBASIC17.65■□□□□ 0.42
Lrch1P62046 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrch1P62046 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrch1P62046 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Lrch1P62046 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lrch1P62046 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Lrch1P62046 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Lrch1P62046 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lrch1P62046 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lrch1P62046 Gm11918-201ENSMUST00000121660 179 ntBASIC17.64■□□□□ 0.41
Lrch1P62046 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lrch1P62046 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lrch1P62046 Gm5479-201ENSMUST00000160578 435 ntBASIC17.64■□□□□ 0.41
Lrch1P62046 AY702102-202ENSMUST00000194651 1173 ntBASIC17.64■□□□□ 0.41
Lrch1P62046 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC17.64■□□□□ 0.41
Lrch1P62046 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC17.64■□□□□ 0.41
Lrch1P62046 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lrch1P62046 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Lrch1P62046 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms