Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup43P59235 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nup43P59235 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.25□□□□□ -0.13
Nup43P59235 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup43P59235 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup43P59235 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nup43P59235 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup43P59235 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup43P59235 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup43P59235 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup43P59235 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Nup43P59235 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.24□□□□□ -0.13
Nup43P59235 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup43P59235 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup43P59235 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup43P59235 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nup43P59235 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.24□□□□□ -0.13
Nup43P59235 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
Nup43P59235 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nup43P59235 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup43P59235 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup43P59235 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup43P59235 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup43P59235 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nup43P59235 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nup43P59235 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nup43P59235 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Nup43P59235 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Nup43P59235 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup43P59235 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Nup43P59235 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup43P59235 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup43P59235 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup43P59235 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup43P59235 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Nup43P59235 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.23□□□□□ -0.13
Nup43P59235 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.23□□□□□ -0.13
Nup43P59235 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Nup43P59235 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.23□□□□□ -0.13
Nup43P59235 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.23□□□□□ -0.13
Nup43P59235 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup43P59235 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nup43P59235 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nup43P59235 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.23□□□□□ -0.13
Nup43P59235 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup43P59235 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nup43P59235 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup43P59235 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup43P59235 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup43P59235 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Nup43P59235 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup43P59235 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nup43P59235 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup43P59235 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup43P59235 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup43P59235 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Nup43P59235 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nup43P59235 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
Nup43P59235 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup43P59235 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.22□□□□□ -0.13
Nup43P59235 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup43P59235 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup43P59235 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nup43P59235 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nup43P59235 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Nup43P59235 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup43P59235 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup43P59235 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.22□□□□□ -0.13
Nup43P59235 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup43P59235 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nup43P59235 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.22□□□□□ -0.13
Nup43P59235 Gm12008-201ENSMUST00000117791 755 ntBASIC14.22□□□□□ -0.13
Nup43P59235 Gm13597-201ENSMUST00000121239 375 ntBASIC14.22□□□□□ -0.13
Nup43P59235 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup43P59235 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup43P59235 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Nup43P59235 Gm27525-201ENSMUST00000184465 107 ntBASIC14.22□□□□□ -0.13
Nup43P59235 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.22□□□□□ -0.13
Nup43P59235 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nup43P59235 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nup43P59235 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup43P59235 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup43P59235 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Nup43P59235 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup43P59235 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Nup43P59235 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nup43P59235 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup43P59235 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup43P59235 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nup43P59235 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup43P59235 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.22□□□□□ -0.13
Nup43P59235 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup43P59235 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nup43P59235 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup43P59235 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup43P59235 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Nup43P59235 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup43P59235 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup43P59235 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nup43P59235 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms