Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm2P58774 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm2P58774 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm2P58774 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm2P58774 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm2P58774 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.35■□□□□ 0.37
Tpm2P58774 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.35■□□□□ 0.37
Tpm2P58774 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC17.35■□□□□ 0.37
Tpm2P58774 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm2P58774 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm2P58774 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tpm2P58774 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Tpm2P58774 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm2P58774 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Tpm2P58774 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm2P58774 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm2P58774 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.34■□□□□ 0.37
Tpm2P58774 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.34■□□□□ 0.37
Tpm2P58774 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm2P58774 Gm6623-201ENSMUST00000173570 544 ntBASIC17.34■□□□□ 0.37
Tpm2P58774 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm2P58774 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.34■□□□□ 0.37
Tpm2P58774 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm2P58774 Gm18032-201ENSMUST00000222541 538 ntBASIC17.34■□□□□ 0.37
Tpm2P58774 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.34■□□□□ 0.37
Tpm2P58774 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm2P58774 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm2P58774 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm2P58774 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm2P58774 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm2P58774 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Tpm2P58774 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm2P58774 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm2P58774 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Tpm2P58774 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tpm2P58774 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.34■□□□□ 0.37
Tpm2P58774 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tpm2P58774 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tpm2P58774 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tpm2P58774 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tpm2P58774 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Tpm2P58774 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC17.33■□□□□ 0.37
Tpm2P58774 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Tpm2P58774 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tpm2P58774 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.33■□□□□ 0.37
Tpm2P58774 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tpm2P58774 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm2P58774 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm2P58774 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm2P58774 Gm9987-201ENSMUST00000069768 567 ntBASIC17.33■□□□□ 0.36
Tpm2P58774 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm2P58774 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm2P58774 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Tpm2P58774 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm2P58774 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Tpm2P58774 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Tpm2P58774 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.33■□□□□ 0.36
Tpm2P58774 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tpm2P58774 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm2P58774 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Tpm2P58774 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Tpm2P58774 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Tpm2P58774 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm2P58774 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.32■□□□□ 0.36
Tpm2P58774 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm2P58774 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Tpm2P58774 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm2P58774 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm2P58774 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm2P58774 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Tpm2P58774 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm2P58774 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tpm2P58774 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm2P58774 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Tpm2P58774 AC153366.2-201ENSMUST00000219461 1984 ntBASIC17.31■□□□□ 0.36
Tpm2P58774 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm2P58774 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm2P58774 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm2P58774 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC17.31■□□□□ 0.36
Tpm2P58774 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm2P58774 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm2P58774 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.31■□□□□ 0.36
Tpm2P58774 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm2P58774 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm2P58774 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm2P58774 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.31■□□□□ 0.36
Tpm2P58774 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.31■□□□□ 0.36
Tpm2P58774 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.31■□□□□ 0.36
Tpm2P58774 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm2P58774 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm2P58774 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm2P58774 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm2P58774 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm2P58774 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm2P58774 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm2P58774 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tpm2P58774 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Tpm2P58774 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Tpm2P58774 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC17.31■□□□□ 0.36
Tpm2P58774 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms