Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh11P55288 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cdh11P55288 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.76□□□□□ -0.21
Cdh11P55288 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh11P55288 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh11P55288 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.76□□□□□ -0.21
Cdh11P55288 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.76□□□□□ -0.21
Cdh11P55288 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh11P55288 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.76□□□□□ -0.21
Cdh11P55288 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.76□□□□□ -0.21
Cdh11P55288 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh11P55288 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh11P55288 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh11P55288 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cdh11P55288 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh11P55288 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh11P55288 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh11P55288 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cdh11P55288 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh11P55288 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh11P55288 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh11P55288 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh11P55288 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cdh11P55288 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh11P55288 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh11P55288 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh11P55288 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh11P55288 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.75□□□□□ -0.21
Cdh11P55288 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh11P55288 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cdh11P55288 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh11P55288 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh11P55288 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh11P55288 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh11P55288 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cdh11P55288 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh11P55288 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh11P55288 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh11P55288 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.75□□□□□ -0.21
Cdh11P55288 Gm6443-201ENSMUST00000203599 874 ntBASIC13.75□□□□□ -0.21
Cdh11P55288 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh11P55288 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Cdh11P55288 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Cdh11P55288 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh11P55288 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh11P55288 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Cdh11P55288 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.75□□□□□ -0.21
Cdh11P55288 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cdh11P55288 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh11P55288 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.75□□□□□ -0.21
Cdh11P55288 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cdh11P55288 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh11P55288 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh11P55288 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.75□□□□□ -0.21
Cdh11P55288 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh11P55288 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cdh11P55288 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cdh11P55288 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh11P55288 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Cdh11P55288 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cdh11P55288 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cdh11P55288 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh11P55288 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh11P55288 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh11P55288 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Cdh11P55288 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh11P55288 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Cdh11P55288 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cdh11P55288 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Cdh11P55288 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh11P55288 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.74□□□□□ -0.21
Cdh11P55288 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Cdh11P55288 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.74□□□□□ -0.21
Cdh11P55288 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh11P55288 Gm43514-201ENSMUST00000198852 424 ntBASIC13.74□□□□□ -0.21
Cdh11P55288 Gm2651-201ENSMUST00000203560 838 ntBASIC13.74□□□□□ -0.21
Cdh11P55288 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.74□□□□□ -0.21
Cdh11P55288 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh11P55288 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.74□□□□□ -0.21
Cdh11P55288 Gm6296-201ENSMUST00000222599 943 ntBASIC13.74□□□□□ -0.21
Cdh11P55288 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh11P55288 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh11P55288 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh11P55288 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh11P55288 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh11P55288 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh11P55288 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
Cdh11P55288 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh11P55288 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh11P55288 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cdh11P55288 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh11P55288 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh11P55288 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh11P55288 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.73□□□□□ -0.21
Cdh11P55288 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh11P55288 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh11P55288 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh11P55288 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdh11P55288 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Cdh11P55288 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms