Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkn2bP55271 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Cdkn2bP55271 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkn2bP55271 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkn2bP55271 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkn2bP55271 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkn2bP55271 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkn2bP55271 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkn2bP55271 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkn2bP55271 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.46□□□□□ -0.09
Cdkn2bP55271 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkn2bP55271 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkn2bP55271 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkn2bP55271 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkn2bP55271 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkn2bP55271 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkn2bP55271 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Cdkn2bP55271 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkn2bP55271 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkn2bP55271 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkn2bP55271 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Cdkn2bP55271 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cdkn2bP55271 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdkn2bP55271 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdkn2bP55271 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Cdkn2bP55271 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdkn2bP55271 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cdkn2bP55271 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Cdkn2bP55271 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn2bP55271 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn2bP55271 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn2bP55271 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Cdkn2bP55271 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn2bP55271 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn2bP55271 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.45□□□□□ -0.1
Cdkn2bP55271 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cdkn2bP55271 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn2bP55271 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn2bP55271 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Cdkn2bP55271 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.45□□□□□ -0.1
Cdkn2bP55271 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn2bP55271 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.45□□□□□ -0.1
Cdkn2bP55271 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Cdkn2bP55271 Gm10499-201ENSMUST00000174094 934 ntBASIC14.45□□□□□ -0.1
Cdkn2bP55271 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn2bP55271 Gm27646-201ENSMUST00000183989 110 ntBASIC14.45□□□□□ -0.1
Cdkn2bP55271 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn2bP55271 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Cdkn2bP55271 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn2bP55271 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Cdkn2bP55271 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn2bP55271 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn2bP55271 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn2bP55271 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn2bP55271 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.45□□□□□ -0.1
Cdkn2bP55271 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn2bP55271 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn2bP55271 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn2bP55271 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn2bP55271 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn2bP55271 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn2bP55271 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn2bP55271 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn2bP55271 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn2bP55271 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Cdkn2bP55271 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn2bP55271 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn2bP55271 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cdkn2bP55271 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkn2bP55271 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkn2bP55271 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkn2bP55271 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkn2bP55271 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkn2bP55271 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkn2bP55271 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkn2bP55271 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.44□□□□□ -0.1
Cdkn2bP55271 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkn2bP55271 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.44□□□□□ -0.1
Cdkn2bP55271 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkn2bP55271 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Cdkn2bP55271 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.44□□□□□ -0.1
Cdkn2bP55271 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkn2bP55271 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkn2bP55271 Gm43767-201ENSMUST00000198933 381 ntBASIC14.44□□□□□ -0.1
Cdkn2bP55271 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkn2bP55271 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.44□□□□□ -0.1
Cdkn2bP55271 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkn2bP55271 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Cdkn2bP55271 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkn2bP55271 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cdkn2bP55271 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Cdkn2bP55271 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkn2bP55271 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkn2bP55271 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkn2bP55271 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkn2bP55271 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkn2bP55271 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkn2bP55271 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdkn2bP55271 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.43□□□□□ -0.1
Cdkn2bP55271 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms