Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nub1P54729 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Nub1P54729 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.22■□□□□ 0.19
Nub1P54729 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.22■□□□□ 0.19
Nub1P54729 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nub1P54729 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.22■□□□□ 0.19
Nub1P54729 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nub1P54729 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.22■□□□□ 0.19
Nub1P54729 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Nub1P54729 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nub1P54729 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.22■□□□□ 0.19
Nub1P54729 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nub1P54729 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.22■□□□□ 0.19
Nub1P54729 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.22■□□□□ 0.19
Nub1P54729 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.22■□□□□ 0.19
Nub1P54729 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Nub1P54729 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nub1P54729 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC16.22■□□□□ 0.19
Nub1P54729 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nub1P54729 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nub1P54729 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.22■□□□□ 0.19
Nub1P54729 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nub1P54729 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nub1P54729 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Nub1P54729 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nub1P54729 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.21■□□□□ 0.19
Nub1P54729 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nub1P54729 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.21■□□□□ 0.19
Nub1P54729 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nub1P54729 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nub1P54729 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nub1P54729 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nub1P54729 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
Nub1P54729 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nub1P54729 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.21■□□□□ 0.19
Nub1P54729 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nub1P54729 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.21■□□□□ 0.19
Nub1P54729 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.21■□□□□ 0.19
Nub1P54729 AW822252-206ENSMUST00000208904 237 ntBASIC16.21■□□□□ 0.19
Nub1P54729 Gm18246-201ENSMUST00000221023 728 ntBASIC16.21■□□□□ 0.19
Nub1P54729 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.21■□□□□ 0.19
Nub1P54729 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nub1P54729 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Nub1P54729 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Nub1P54729 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nub1P54729 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nub1P54729 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nub1P54729 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nub1P54729 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nub1P54729 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nub1P54729 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Nub1P54729 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Nub1P54729 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Nub1P54729 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Nub1P54729 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.21■□□□□ 0.18
Nub1P54729 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Nub1P54729 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Nub1P54729 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.2■□□□□ 0.18
Nub1P54729 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nub1P54729 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.2■□□□□ 0.18
Nub1P54729 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Nub1P54729 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.2■□□□□ 0.18
Nub1P54729 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nub1P54729 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nub1P54729 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nub1P54729 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nub1P54729 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nub1P54729 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nub1P54729 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nub1P54729 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Nub1P54729 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Nub1P54729 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nub1P54729 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nub1P54729 Gm14140-201ENSMUST00000119999 995 ntBASIC16.2■□□□□ 0.18
Nub1P54729 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nub1P54729 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nub1P54729 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nub1P54729 Gm5364-201ENSMUST00000216789 889 ntBASIC16.2■□□□□ 0.18
Nub1P54729 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nub1P54729 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nub1P54729 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nub1P54729 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nub1P54729 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nub1P54729 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Nub1P54729 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nub1P54729 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Nub1P54729 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nub1P54729 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Nub1P54729 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Nub1P54729 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.2■□□□□ 0.18
Nub1P54729 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.19■□□□□ 0.18
Nub1P54729 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nub1P54729 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nub1P54729 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nub1P54729 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.19■□□□□ 0.18
Nub1P54729 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.19■□□□□ 0.18
Nub1P54729 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.19■□□□□ 0.18
Nub1P54729 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.19■□□□□ 0.18
Nub1P54729 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nub1P54729 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms