Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19■□□□□ 0.63
Msh6P54276 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Msh6P54276 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Msh6P54276 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC19■□□□□ 0.63
Msh6P54276 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Msh6P54276 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
Msh6P54276 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Msh6P54276 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Msh6P54276 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Msh6P54276 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Msh6P54276 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Msh6P54276 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Msh6P54276 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Msh6P54276 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Msh6P54276 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Msh6P54276 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC18.99■□□□□ 0.63
Msh6P54276 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Msh6P54276 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Msh6P54276 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Msh6P54276 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Msh6P54276 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Msh6P54276 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Msh6P54276 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC18.99■□□□□ 0.63
Msh6P54276 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Msh6P54276 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Msh6P54276 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Msh6P54276 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Msh6P54276 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Msh6P54276 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Msh6P54276 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msh6P54276 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msh6P54276 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msh6P54276 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msh6P54276 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Msh6P54276 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Msh6P54276 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Msh6P54276 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Msh6P54276 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Msh6P54276 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msh6P54276 Gm27533-201ENSMUST00000183800 152 ntBASIC18.98■□□□□ 0.63
Msh6P54276 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msh6P54276 Mxra8os-201ENSMUST00000097740 687 ntBASIC18.98■□□□□ 0.63
Msh6P54276 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msh6P54276 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msh6P54276 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msh6P54276 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msh6P54276 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msh6P54276 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msh6P54276 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msh6P54276 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msh6P54276 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msh6P54276 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Msh6P54276 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msh6P54276 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msh6P54276 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
Msh6P54276 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msh6P54276 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Msh6P54276 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Msh6P54276 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msh6P54276 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Msh6P54276 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Msh6P54276 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC18.97■□□□□ 0.63
Msh6P54276 Gm16215-201ENSMUST00000161990 637 ntBASIC18.97■□□□□ 0.63
Msh6P54276 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Msh6P54276 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC18.97■□□□□ 0.63
Msh6P54276 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msh6P54276 Gm30437-201ENSMUST00000206086 1201 ntBASIC18.97■□□□□ 0.63
Msh6P54276 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC18.97■□□□□ 0.63
Msh6P54276 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Msh6P54276 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msh6P54276 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Msh6P54276 Syt7-204ENSMUST00000223586 1344 ntBASIC18.97■□□□□ 0.63
Msh6P54276 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Msh6P54276 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msh6P54276 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msh6P54276 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Msh6P54276 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msh6P54276 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msh6P54276 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Msh6P54276 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msh6P54276 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msh6P54276 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msh6P54276 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Msh6P54276 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Msh6P54276 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Msh6P54276 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Msh6P54276 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Msh6P54276 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC18.96■□□□□ 0.63
Msh6P54276 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Msh6P54276 Gm44855-201ENSMUST00000205725 362 ntBASIC18.96■□□□□ 0.63
Msh6P54276 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Msh6P54276 Gm7653-201ENSMUST00000214567 508 ntBASIC18.96■□□□□ 0.63
Msh6P54276 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Msh6P54276 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Msh6P54276 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Msh6P54276 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Msh6P54276 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Msh6P54276 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Msh6P54276 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Msh6P54276 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms