Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Sox1P53783 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sox1P53783 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Sox1P53783 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox1P53783 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox1P53783 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox1P53783 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Sox1P53783 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Sox1P53783 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sox1P53783 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sox1P53783 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Sox1P53783 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Sox1P53783 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox1P53783 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox1P53783 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sox1P53783 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC15.33■□□□□ 0.04
Sox1P53783 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox1P53783 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC15.33■□□□□ 0.04
Sox1P53783 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sox1P53783 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC15.33■□□□□ 0.04
Sox1P53783 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sox1P53783 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sox1P53783 AC150560.1-201ENSMUST00000227731 1187 ntBASIC15.33■□□□□ 0.04
Sox1P53783 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox1P53783 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sox1P53783 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.33■□□□□ 0.04
Sox1P53783 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Sox1P53783 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Sox1P53783 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox1P53783 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox1P53783 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Sox1P53783 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox1P53783 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Sox1P53783 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sox1P53783 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.32■□□□□ 0.04
Sox1P53783 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sox1P53783 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Sox1P53783 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox1P53783 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox1P53783 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox1P53783 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sox1P53783 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox1P53783 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox1P53783 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sox1P53783 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox1P53783 Ldha-ps-201ENSMUST00000119390 995 ntBASIC15.32■□□□□ 0.04
Sox1P53783 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC15.32■□□□□ 0.04
Sox1P53783 Snora78-201ENSMUST00000158630 128 ntBASIC15.32■□□□□ 0.04
Sox1P53783 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC15.32■□□□□ 0.04
Sox1P53783 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox1P53783 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Sox1P53783 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Sox1P53783 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Sox1P53783 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox1P53783 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox1P53783 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox1P53783 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC15.32■□□□□ 0.04
Sox1P53783 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox1P53783 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox1P53783 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox1P53783 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.32■□□□□ 0.04
Sox1P53783 Gm18222-201ENSMUST00000202416 1387 ntBASIC15.32■□□□□ 0.04
Sox1P53783 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox1P53783 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sox1P53783 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Sox1P53783 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sox1P53783 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox1P53783 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sox1P53783 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox1P53783 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox1P53783 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox1P53783 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox1P53783 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox1P53783 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.31■□□□□ 0.04
Sox1P53783 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Sox1P53783 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sox1P53783 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sox1P53783 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC15.31■□□□□ 0.04
Sox1P53783 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Sox1P53783 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC15.31■□□□□ 0.04
Sox1P53783 Gm27243-201ENSMUST00000183964 521 ntBASIC15.31■□□□□ 0.04
Sox1P53783 Dupd1-202ENSMUST00000224735 548 ntBASIC15.31■□□□□ 0.04
Sox1P53783 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox1P53783 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox1P53783 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox1P53783 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox1P53783 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox1P53783 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox1P53783 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.31■□□□□ 0.04
Sox1P53783 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sox1P53783 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sox1P53783 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Sox1P53783 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sox1P53783 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Sox1P53783 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Sox1P53783 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Sox1P53783 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox1P53783 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sox1P53783 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.3■□□□□ 0.04
Sox1P53783 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms