Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Brca1P48754 Gm10766-202ENSMUST00000194123 606 ntBASIC16.7■□□□□ 0.26
Brca1P48754 AA619741-201ENSMUST00000195095 646 ntBASIC16.7■□□□□ 0.26
Brca1P48754 AC155286.1-201ENSMUST00000218632 448 ntBASIC16.7■□□□□ 0.26
Brca1P48754 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Brca1P48754 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Brca1P48754 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Brca1P48754 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Brca1P48754 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Brca1P48754 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Brca1P48754 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Brca1P48754 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Brca1P48754 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Brca1P48754 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Brca1P48754 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Brca1P48754 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Brca1P48754 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Brca1P48754 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.69■□□□□ 0.26
Brca1P48754 Mir1894-201ENSMUST00000122802 81 ntBASIC16.69■□□□□ 0.26
Brca1P48754 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Brca1P48754 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.69■□□□□ 0.26
Brca1P48754 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC16.69■□□□□ 0.26
Brca1P48754 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Brca1P48754 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC16.69■□□□□ 0.26
Brca1P48754 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Brca1P48754 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Brca1P48754 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Brca1P48754 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Brca1P48754 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Brca1P48754 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Brca1P48754 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.69■□□□□ 0.26
Brca1P48754 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.69■□□□□ 0.26
Brca1P48754 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Brca1P48754 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Brca1P48754 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Brca1P48754 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Brca1P48754 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Brca1P48754 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Brca1P48754 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Brca1P48754 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Brca1P48754 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Brca1P48754 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Brca1P48754 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.68■□□□□ 0.26
Brca1P48754 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.68■□□□□ 0.26
Brca1P48754 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Brca1P48754 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.68■□□□□ 0.26
Brca1P48754 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Brca1P48754 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Brca1P48754 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Brca1P48754 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Brca1P48754 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Brca1P48754 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Brca1P48754 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Brca1P48754 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Brca1P48754 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Brca1P48754 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Brca1P48754 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Brca1P48754 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Brca1P48754 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Brca1P48754 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Brca1P48754 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.68■□□□□ 0.26
Brca1P48754 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.68■□□□□ 0.26
Brca1P48754 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Brca1P48754 Gm9726-201ENSMUST00000180321 678 ntBASIC16.68■□□□□ 0.26
Brca1P48754 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.68■□□□□ 0.26
Brca1P48754 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Brca1P48754 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Brca1P48754 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Brca1P48754 Gm9200-201ENSMUST00000118513 1354 ntBASIC16.67■□□□□ 0.26
Brca1P48754 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Brca1P48754 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Brca1P48754 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Brca1P48754 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Brca1P48754 App-207ENSMUST00000227737 2827 ntBASIC16.67■□□□□ 0.26
Brca1P48754 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Brca1P48754 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Brca1P48754 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Brca1P48754 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Brca1P48754 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Brca1P48754 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.67■□□□□ 0.26
Brca1P48754 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Brca1P48754 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Brca1P48754 Mir6392-201ENSMUST00000184924 108 ntBASIC16.67■□□□□ 0.26
Brca1P48754 Gm5356-201ENSMUST00000093326 615 ntBASIC16.67■□□□□ 0.26
Brca1P48754 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Brca1P48754 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Brca1P48754 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Brca1P48754 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Brca1P48754 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Brca1P48754 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Brca1P48754 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Brca1P48754 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.67■□□□□ 0.26
Brca1P48754 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Brca1P48754 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Brca1P48754 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Brca1P48754 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Brca1P48754 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Brca1P48754 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC16.66■□□□□ 0.26
Brca1P48754 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Brca1P48754 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms