Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfsf4P43488 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfsf4P43488 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Tnfsf4P43488 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Tnfsf4P43488 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.58□□□□□ -0.07
Tnfsf4P43488 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Tnfsf4P43488 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Tnfsf4P43488 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.58□□□□□ -0.07
Tnfsf4P43488 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfsf4P43488 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfsf4P43488 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfsf4P43488 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfsf4P43488 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfsf4P43488 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfsf4P43488 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfsf4P43488 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.58□□□□□ -0.08
Tnfsf4P43488 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfsf4P43488 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.58□□□□□ -0.08
Tnfsf4P43488 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfsf4P43488 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfsf4P43488 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfsf4P43488 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Tnfsf4P43488 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Tnfsf4P43488 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfsf4P43488 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfsf4P43488 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfsf4P43488 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfsf4P43488 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfsf4P43488 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfsf4P43488 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Tnfsf4P43488 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.57□□□□□ -0.08
Tnfsf4P43488 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfsf4P43488 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.57□□□□□ -0.08
Tnfsf4P43488 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfsf4P43488 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.57□□□□□ -0.08
Tnfsf4P43488 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfsf4P43488 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfsf4P43488 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Tnfsf4P43488 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfsf4P43488 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfsf4P43488 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfsf4P43488 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.57□□□□□ -0.08
Tnfsf4P43488 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfsf4P43488 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Tnfsf4P43488 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.57□□□□□ -0.08
Tnfsf4P43488 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Tnfsf4P43488 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Tnfsf4P43488 Gm12134-201ENSMUST00000122109 520 ntBASIC14.57□□□□□ -0.08
Tnfsf4P43488 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.57□□□□□ -0.08
Tnfsf4P43488 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfsf4P43488 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.57□□□□□ -0.08
Tnfsf4P43488 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.57□□□□□ -0.08
Tnfsf4P43488 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.57□□□□□ -0.08
Tnfsf4P43488 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfsf4P43488 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Tnfsf4P43488 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfsf4P43488 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfsf4P43488 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfsf4P43488 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfsf4P43488 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Tnfsf4P43488 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfsf4P43488 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfsf4P43488 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Tnfsf4P43488 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfsf4P43488 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfsf4P43488 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfsf4P43488 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfsf4P43488 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.56□□□□□ -0.08
Tnfsf4P43488 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.56□□□□□ -0.08
Tnfsf4P43488 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfsf4P43488 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Tnfsf4P43488 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Tnfsf4P43488 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfsf4P43488 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfsf4P43488 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfsf4P43488 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfsf4P43488 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfsf4P43488 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfsf4P43488 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfsf4P43488 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfsf4P43488 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfsf4P43488 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfsf4P43488 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Tnfsf4P43488 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Tnfsf4P43488 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.56□□□□□ -0.08
Tnfsf4P43488 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfsf4P43488 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Tnfsf4P43488 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfsf4P43488 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfsf4P43488 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfsf4P43488 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.56□□□□□ -0.08
Tnfsf4P43488 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfsf4P43488 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfsf4P43488 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfsf4P43488 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfsf4P43488 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfsf4P43488 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfsf4P43488 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfsf4P43488 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.56□□□□□ -0.08
Tnfsf4P43488 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms