Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.93■□□□□ 0.3
Sdc2P43407 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.93■□□□□ 0.3
Sdc2P43407 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.93■□□□□ 0.3
Sdc2P43407 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sdc2P43407 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sdc2P43407 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sdc2P43407 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Sdc2P43407 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sdc2P43407 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sdc2P43407 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sdc2P43407 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sdc2P43407 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sdc2P43407 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sdc2P43407 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sdc2P43407 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sdc2P43407 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sdc2P43407 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Sdc2P43407 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Sdc2P43407 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sdc2P43407 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sdc2P43407 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sdc2P43407 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sdc2P43407 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Sdc2P43407 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.92■□□□□ 0.3
Sdc2P43407 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sdc2P43407 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sdc2P43407 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Sdc2P43407 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sdc2P43407 Ank2-226ENSMUST00000189368 339 ntBASIC16.92■□□□□ 0.3
Sdc2P43407 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sdc2P43407 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sdc2P43407 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sdc2P43407 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sdc2P43407 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sdc2P43407 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sdc2P43407 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.92■□□□□ 0.3
Sdc2P43407 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Sdc2P43407 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.91■□□□□ 0.3
Sdc2P43407 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sdc2P43407 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sdc2P43407 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sdc2P43407 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Sdc2P43407 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.91■□□□□ 0.3
Sdc2P43407 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Sdc2P43407 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Sdc2P43407 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.91■□□□□ 0.3
Sdc2P43407 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.91■□□□□ 0.3
Sdc2P43407 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sdc2P43407 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.91■□□□□ 0.3
Sdc2P43407 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sdc2P43407 Gm4535-201ENSMUST00000182274 558 ntBASIC16.91■□□□□ 0.3
Sdc2P43407 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sdc2P43407 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sdc2P43407 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.91■□□□□ 0.3
Sdc2P43407 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Sdc2P43407 Gm10355-201ENSMUST00000097146 517 ntBASIC16.91■□□□□ 0.3
Sdc2P43407 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sdc2P43407 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Sdc2P43407 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Sdc2P43407 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sdc2P43407 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sdc2P43407 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.91■□□□□ 0.3
Sdc2P43407 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sdc2P43407 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Sdc2P43407 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sdc2P43407 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sdc2P43407 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sdc2P43407 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sdc2P43407 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sdc2P43407 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sdc2P43407 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.91■□□□□ 0.3
Sdc2P43407 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sdc2P43407 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sdc2P43407 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sdc2P43407 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Sdc2P43407 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.9■□□□□ 0.3
Sdc2P43407 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sdc2P43407 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sdc2P43407 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC16.9■□□□□ 0.3
Sdc2P43407 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Sdc2P43407 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sdc2P43407 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sdc2P43407 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sdc2P43407 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.9■□□□□ 0.3
Sdc2P43407 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sdc2P43407 Gm10499-201ENSMUST00000174094 934 ntBASIC16.9■□□□□ 0.3
Sdc2P43407 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.9■□□□□ 0.3
Sdc2P43407 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.9■□□□□ 0.3
Sdc2P43407 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sdc2P43407 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sdc2P43407 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Sdc2P43407 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Sdc2P43407 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Sdc2P43407 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sdc2P43407 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Sdc2P43407 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sdc2P43407 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sdc2P43407 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.9■□□□□ 0.3
Sdc2P43407 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sdc2P43407 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms