Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdkn1aP39689 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdkn1aP39689 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdkn1aP39689 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdkn1aP39689 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdkn1aP39689 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdkn1aP39689 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cdkn1aP39689 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdkn1aP39689 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Cdkn1aP39689 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdkn1aP39689 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdkn1aP39689 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdkn1aP39689 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.42□□□□□ -0.42
Cdkn1aP39689 Gm13365-201ENSMUST00000121188 973 ntBASIC12.42□□□□□ -0.42
Cdkn1aP39689 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdkn1aP39689 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdkn1aP39689 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdkn1aP39689 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.42□□□□□ -0.42
Cdkn1aP39689 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdkn1aP39689 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdkn1aP39689 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdkn1aP39689 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.42□□□□□ -0.42
Cdkn1aP39689 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdkn1aP39689 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdkn1aP39689 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdkn1aP39689 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdkn1aP39689 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdkn1aP39689 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Cdkn1aP39689 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdkn1aP39689 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cdkn1aP39689 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdkn1aP39689 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.42□□□□□ -0.42
Cdkn1aP39689 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdkn1aP39689 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdkn1aP39689 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdkn1aP39689 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdkn1aP39689 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdkn1aP39689 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.42□□□□□ -0.42
Cdkn1aP39689 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdkn1aP39689 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cdkn1aP39689 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdkn1aP39689 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdkn1aP39689 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdkn1aP39689 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdkn1aP39689 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cdkn1aP39689 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdkn1aP39689 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdkn1aP39689 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdkn1aP39689 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cdkn1aP39689 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdkn1aP39689 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdkn1aP39689 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.41□□□□□ -0.42
Cdkn1aP39689 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.41□□□□□ -0.42
Cdkn1aP39689 Rprl2-201ENSMUST00000157150 290 ntBASIC12.41□□□□□ -0.42
Cdkn1aP39689 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdkn1aP39689 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Cdkn1aP39689 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Cdkn1aP39689 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdkn1aP39689 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdkn1aP39689 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cdkn1aP39689 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdkn1aP39689 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.41□□□□□ -0.42
Cdkn1aP39689 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdkn1aP39689 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdkn1aP39689 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdkn1aP39689 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdkn1aP39689 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdkn1aP39689 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn1aP39689 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Cdkn1aP39689 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn1aP39689 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn1aP39689 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn1aP39689 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn1aP39689 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn1aP39689 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn1aP39689 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn1aP39689 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn1aP39689 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Cdkn1aP39689 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn1aP39689 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.4□□□□□ -0.42
Cdkn1aP39689 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.4□□□□□ -0.42
Cdkn1aP39689 Gm44335-201ENSMUST00000196879 141 ntBASIC12.4□□□□□ -0.42
Cdkn1aP39689 Gm44297-201ENSMUST00000198304 141 ntBASIC12.4□□□□□ -0.42
Cdkn1aP39689 Gm44346-201ENSMUST00000198851 141 ntBASIC12.4□□□□□ -0.42
Cdkn1aP39689 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.4□□□□□ -0.42
Cdkn1aP39689 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.4□□□□□ -0.42
Cdkn1aP39689 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn1aP39689 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn1aP39689 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn1aP39689 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn1aP39689 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn1aP39689 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Cdkn1aP39689 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Cdkn1aP39689 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn1aP39689 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn1aP39689 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn1aP39689 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdkn1aP39689 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cdkn1aP39689 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cdkn1aP39689 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms