Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC19.72■□□□□ 0.75
Col18a1P39061 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Col18a1P39061 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Col18a1P39061 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Col18a1P39061 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.72■□□□□ 0.75
Col18a1P39061 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col18a1P39061 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC19.72■□□□□ 0.75
Col18a1P39061 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col18a1P39061 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col18a1P39061 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.72■□□□□ 0.75
Col18a1P39061 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Col18a1P39061 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col18a1P39061 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Col18a1P39061 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col18a1P39061 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Col18a1P39061 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Col18a1P39061 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col18a1P39061 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC19.71■□□□□ 0.75
Col18a1P39061 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col18a1P39061 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Col18a1P39061 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col18a1P39061 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col18a1P39061 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC19.71■□□□□ 0.75
Col18a1P39061 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Col18a1P39061 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC19.71■□□□□ 0.75
Col18a1P39061 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC19.71■□□□□ 0.75
Col18a1P39061 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col18a1P39061 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col18a1P39061 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col18a1P39061 Gm10012-201ENSMUST00000078252 192 ntBASIC19.71■□□□□ 0.75
Col18a1P39061 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col18a1P39061 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col18a1P39061 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col18a1P39061 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col18a1P39061 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col18a1P39061 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col18a1P39061 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col18a1P39061 Gm42473-201ENSMUST00000201056 2291 ntBASIC19.71■□□□□ 0.75
Col18a1P39061 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Col18a1P39061 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Col18a1P39061 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Col18a1P39061 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Col18a1P39061 Gm38037-201ENSMUST00000192600 1624 ntBASIC19.7■□□□□ 0.74
Col18a1P39061 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC19.7■□□□□ 0.74
Col18a1P39061 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC19.7■□□□□ 0.74
Col18a1P39061 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Col18a1P39061 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Col18a1P39061 Zscan30-202ENSMUST00000224144 1458 ntBASIC19.7■□□□□ 0.74
Col18a1P39061 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col18a1P39061 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col18a1P39061 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Col18a1P39061 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Col18a1P39061 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col18a1P39061 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col18a1P39061 Gm10327-201ENSMUST00000105222 1002 ntBASIC19.7■□□□□ 0.74
Col18a1P39061 Gm5187-201ENSMUST00000117317 991 ntBASIC19.7■□□□□ 0.74
Col18a1P39061 Gm15429-201ENSMUST00000151268 798 ntBASIC19.7■□□□□ 0.74
Col18a1P39061 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Col18a1P39061 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC19.7■□□□□ 0.74
Col18a1P39061 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Col18a1P39061 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC19.7■□□□□ 0.74
Col18a1P39061 Gm5425-201ENSMUST00000214125 459 ntBASIC19.7■□□□□ 0.74
Col18a1P39061 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col18a1P39061 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.69■□□□□ 0.74
Col18a1P39061 Gm7553-201ENSMUST00000185805 1426 ntBASIC19.69■□□□□ 0.74
Col18a1P39061 AC153526.5-201ENSMUST00000218661 2147 ntBASIC19.69■□□□□ 0.74
Col18a1P39061 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col18a1P39061 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Col18a1P39061 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col18a1P39061 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col18a1P39061 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Col18a1P39061 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC19.69■□□□□ 0.74
Col18a1P39061 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC19.69■□□□□ 0.74
Col18a1P39061 Gm15240-201ENSMUST00000118156 720 ntBASIC19.69■□□□□ 0.74
Col18a1P39061 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC19.69■□□□□ 0.74
Col18a1P39061 Gm43118-201ENSMUST00000199149 775 ntBASIC19.69■□□□□ 0.74
Col18a1P39061 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Col18a1P39061 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col18a1P39061 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col18a1P39061 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.69■□□□□ 0.74
Col18a1P39061 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col18a1P39061 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col18a1P39061 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col18a1P39061 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col18a1P39061 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Col18a1P39061 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Col18a1P39061 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Col18a1P39061 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col18a1P39061 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col18a1P39061 Gm9726-201ENSMUST00000180321 678 ntBASIC19.68■□□□□ 0.74
Col18a1P39061 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC19.68■□□□□ 0.74
Col18a1P39061 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Col18a1P39061 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Col18a1P39061 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col18a1P39061 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col18a1P39061 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col18a1P39061 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col18a1P39061 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.68■□□□□ 0.74
Col18a1P39061 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Col18a1P39061 Gm11524-201ENSMUST00000119349 807 ntBASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms