Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cdh4P39038 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdh4P39038 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cdh4P39038 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdh4P39038 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdh4P39038 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cdh4P39038 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdh4P39038 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdh4P39038 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdh4P39038 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdh4P39038 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdh4P39038 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdh4P39038 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cdh4P39038 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Cdh4P39038 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.43□□□□□ -0.1
Cdh4P39038 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdh4P39038 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Cdh4P39038 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cdh4P39038 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Cdh4P39038 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdh4P39038 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdh4P39038 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdh4P39038 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdh4P39038 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.43□□□□□ -0.1
Cdh4P39038 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdh4P39038 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Cdh4P39038 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cdh4P39038 Sybu-209ENSMUST00000228639 4113 ntBASIC14.43□□□□□ -0.1
Cdh4P39038 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh4P39038 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh4P39038 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cdh4P39038 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh4P39038 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh4P39038 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh4P39038 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Cdh4P39038 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh4P39038 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh4P39038 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh4P39038 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cdh4P39038 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh4P39038 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cdh4P39038 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh4P39038 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh4P39038 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh4P39038 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.42□□□□□ -0.1
Cdh4P39038 Gm11779-201ENSMUST00000118541 368 ntBASIC14.42□□□□□ -0.1
Cdh4P39038 Gm15467-201ENSMUST00000120582 445 ntBASIC14.42□□□□□ -0.1
Cdh4P39038 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh4P39038 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Cdh4P39038 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.42□□□□□ -0.1
Cdh4P39038 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh4P39038 Gm8000-201ENSMUST00000188378 592 ntBASIC14.42□□□□□ -0.1
Cdh4P39038 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.42□□□□□ -0.1
Cdh4P39038 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.42□□□□□ -0.1
Cdh4P39038 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh4P39038 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh4P39038 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh4P39038 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh4P39038 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh4P39038 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh4P39038 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cdh4P39038 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh4P39038 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh4P39038 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh4P39038 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Cdh4P39038 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh4P39038 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cdh4P39038 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cdh4P39038 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh4P39038 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh4P39038 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh4P39038 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh4P39038 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh4P39038 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh4P39038 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh4P39038 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.41□□□□□ -0.1
Cdh4P39038 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh4P39038 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.41□□□□□ -0.1
Cdh4P39038 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.41□□□□□ -0.1
Cdh4P39038 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.41□□□□□ -0.1
Cdh4P39038 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cdh4P39038 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh4P39038 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh4P39038 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh4P39038 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.41□□□□□ -0.1
Cdh4P39038 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh4P39038 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.41□□□□□ -0.1
Cdh4P39038 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh4P39038 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh4P39038 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Cdh4P39038 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh4P39038 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh4P39038 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh4P39038 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Cdh4P39038 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh4P39038 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cdh4P39038 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.41□□□□□ -0.1
Cdh4P39038 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh4P39038 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cdh4P39038 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms