Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15□□□□□ -0.01
LdlrP35951 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15□□□□□ -0.01
LdlrP35951 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LdlrP35951 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LdlrP35951 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
LdlrP35951 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
LdlrP35951 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
LdlrP35951 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
LdlrP35951 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
LdlrP35951 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15□□□□□ -0.01
LdlrP35951 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15□□□□□ -0.01
LdlrP35951 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15□□□□□ -0.01
LdlrP35951 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15□□□□□ -0.01
LdlrP35951 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15□□□□□ -0.01
LdlrP35951 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LdlrP35951 Gm15165-201ENSMUST00000118140 502 ntBASIC15□□□□□ -0.01
LdlrP35951 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15□□□□□ -0.01
LdlrP35951 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15□□□□□ -0.01
LdlrP35951 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15□□□□□ -0.01
LdlrP35951 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15□□□□□ -0.01
LdlrP35951 Gm19164-201ENSMUST00000210667 640 ntBASIC15□□□□□ -0.01
LdlrP35951 Gm10060-201ENSMUST00000212002 111 ntBASIC15□□□□□ -0.01
LdlrP35951 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15□□□□□ -0.01
LdlrP35951 AC127349.1-201ENSMUST00000224590 266 ntBASIC15□□□□□ -0.01
LdlrP35951 Cmtm5-203ENSMUST00000227441 610 ntBASIC15□□□□□ -0.01
LdlrP35951 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LdlrP35951 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LdlrP35951 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LdlrP35951 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
LdlrP35951 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LdlrP35951 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
LdlrP35951 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LdlrP35951 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
LdlrP35951 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
LdlrP35951 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15□□□□□ -0.01
LdlrP35951 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LdlrP35951 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15□□□□□ -0.01
LdlrP35951 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LdlrP35951 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15□□□□□ -0.01
LdlrP35951 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
LdlrP35951 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15□□□□□ -0.01
LdlrP35951 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LdlrP35951 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15□□□□□ -0.01
LdlrP35951 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
LdlrP35951 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
LdlrP35951 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LdlrP35951 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LdlrP35951 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
LdlrP35951 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
LdlrP35951 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LdlrP35951 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.99□□□□□ -0.01
LdlrP35951 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.99□□□□□ -0.01
LdlrP35951 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
LdlrP35951 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.99□□□□□ -0.01
LdlrP35951 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.99□□□□□ -0.01
LdlrP35951 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.99□□□□□ -0.01
LdlrP35951 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.99□□□□□ -0.01
LdlrP35951 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.99□□□□□ -0.01
LdlrP35951 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.99□□□□□ -0.01
LdlrP35951 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LdlrP35951 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.99□□□□□ -0.01
LdlrP35951 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LdlrP35951 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LdlrP35951 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LdlrP35951 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
LdlrP35951 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.99□□□□□ -0.01
LdlrP35951 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.99□□□□□ -0.01
LdlrP35951 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LdlrP35951 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
LdlrP35951 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
LdlrP35951 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.99□□□□□ -0.01
LdlrP35951 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LdlrP35951 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LdlrP35951 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LdlrP35951 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LdlrP35951 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LdlrP35951 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LdlrP35951 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LdlrP35951 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LdlrP35951 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LdlrP35951 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LdlrP35951 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
LdlrP35951 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LdlrP35951 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
LdlrP35951 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LdlrP35951 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.98□□□□□ -0.01
LdlrP35951 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.98□□□□□ -0.01
LdlrP35951 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.98□□□□□ -0.01
LdlrP35951 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.98□□□□□ -0.01
LdlrP35951 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LdlrP35951 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LdlrP35951 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LdlrP35951 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LdlrP35951 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LdlrP35951 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LdlrP35951 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.98□□□□□ -0.01
LdlrP35951 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LdlrP35951 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
LdlrP35951 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LdlrP35951 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms