Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC11.95□□□□□ -0.5
Rom1P32958 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Rom1P32958 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Rom1P32958 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rom1P32958 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Rom1P32958 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC11.95□□□□□ -0.5
Rom1P32958 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rom1P32958 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rom1P32958 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Rom1P32958 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rom1P32958 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rom1P32958 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rom1P32958 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Rom1P32958 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rom1P32958 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rom1P32958 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rom1P32958 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rom1P32958 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Rom1P32958 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Rom1P32958 Gm44981-201ENSMUST00000205549 1943 ntBASIC11.94□□□□□ -0.5
Rom1P32958 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Rom1P32958 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rom1P32958 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rom1P32958 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rom1P32958 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rom1P32958 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rom1P32958 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Rom1P32958 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rom1P32958 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rom1P32958 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rom1P32958 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC11.94□□□□□ -0.5
Rom1P32958 Gm45058-201ENSMUST00000205810 766 ntBASIC11.94□□□□□ -0.5
Rom1P32958 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rom1P32958 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rom1P32958 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rom1P32958 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rom1P32958 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rom1P32958 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rom1P32958 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Rom1P32958 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rom1P32958 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rom1P32958 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rom1P32958 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rom1P32958 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC11.94□□□□□ -0.5
Rom1P32958 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rom1P32958 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Rom1P32958 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Rom1P32958 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rom1P32958 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rom1P32958 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC11.93□□□□□ -0.5
Rom1P32958 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rom1P32958 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rom1P32958 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rom1P32958 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rom1P32958 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rom1P32958 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rom1P32958 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rom1P32958 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rom1P32958 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rom1P32958 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rom1P32958 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rom1P32958 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rom1P32958 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC11.93□□□□□ -0.5
Rom1P32958 Zkscan4-202ENSMUST00000225845 1506 ntBASIC11.93□□□□□ -0.5
Rom1P32958 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rom1P32958 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rom1P32958 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Rom1P32958 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Rom1P32958 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rom1P32958 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rom1P32958 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rom1P32958 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rom1P32958 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rom1P32958 AC134329.2-201ENSMUST00000217897 428 ntBASIC11.93□□□□□ -0.5
Rom1P32958 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Rom1P32958 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rom1P32958 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rom1P32958 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rom1P32958 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Rom1P32958 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rom1P32958 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rom1P32958 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Rom1P32958 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rom1P32958 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rom1P32958 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Rom1P32958 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Rom1P32958 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rom1P32958 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rom1P32958 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Rom1P32958 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rom1P32958 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Rom1P32958 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Rom1P32958 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rom1P32958 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rom1P32958 Celf4-206ENSMUST00000224553 1729 ntBASIC11.92□□□□□ -0.5
Rom1P32958 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rom1P32958 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rom1P32958 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Rom1P32958 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Rom1P32958 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms