Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a13P31649 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a13P31649 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a13P31649 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc6a13P31649 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a13P31649 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a13P31649 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a13P31649 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a13P31649 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a13P31649 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a13P31649 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a13P31649 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a13P31649 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a13P31649 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a13P31649 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a13P31649 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a13P31649 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a13P31649 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a13P31649 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a13P31649 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a13P31649 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a13P31649 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a13P31649 Gm17968-201ENSMUST00000194902 784 ntBASIC15.29■□□□□ 0.04
Slc6a13P31649 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.29■□□□□ 0.04
Slc6a13P31649 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a13P31649 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a13P31649 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a13P31649 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a13P31649 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Slc6a13P31649 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a13P31649 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a13P31649 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Slc6a13P31649 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc6a13P31649 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a13P31649 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.28■□□□□ 0.04
Slc6a13P31649 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a13P31649 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.28■□□□□ 0.04
Slc6a13P31649 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a13P31649 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
Slc6a13P31649 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a13P31649 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a13P31649 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.28■□□□□ 0.04
Slc6a13P31649 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Slc6a13P31649 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.28■□□□□ 0.04
Slc6a13P31649 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a13P31649 Gm12008-201ENSMUST00000117791 755 ntBASIC15.28■□□□□ 0.04
Slc6a13P31649 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Slc6a13P31649 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.28■□□□□ 0.04
Slc6a13P31649 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.28■□□□□ 0.04
Slc6a13P31649 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.28■□□□□ 0.04
Slc6a13P31649 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.28■□□□□ 0.04
Slc6a13P31649 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a13P31649 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Slc6a13P31649 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a13P31649 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a13P31649 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a13P31649 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.28■□□□□ 0.04
Slc6a13P31649 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a13P31649 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a13P31649 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a13P31649 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Slc6a13P31649 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc6a13P31649 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc6a13P31649 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc6a13P31649 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc6a13P31649 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc6a13P31649 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc6a13P31649 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc6a13P31649 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Slc6a13P31649 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc6a13P31649 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc6a13P31649 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc6a13P31649 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc6a13P31649 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Slc6a13P31649 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Slc6a13P31649 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Slc6a13P31649 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc6a13P31649 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.27■□□□□ 0.04
Slc6a13P31649 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc6a13P31649 Gm9727-201ENSMUST00000161387 555 ntBASIC15.27■□□□□ 0.04
Slc6a13P31649 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Slc6a13P31649 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15.27■□□□□ 0.04
Slc6a13P31649 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc6a13P31649 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Slc6a13P31649 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slc6a13P31649 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slc6a13P31649 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Slc6a13P31649 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slc6a13P31649 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.27■□□□□ 0.03
Slc6a13P31649 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Slc6a13P31649 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slc6a13P31649 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slc6a13P31649 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slc6a13P31649 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Slc6a13P31649 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc6a13P31649 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc6a13P31649 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc6a13P31649 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Slc6a13P31649 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Slc6a13P31649 Gm11779-201ENSMUST00000118541 368 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms