Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Wdyhv1-206ENSMUST00000227142 786 ntBASIC17.26■□□□□ 0.35
Vcam1P29533 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vcam1P29533 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vcam1P29533 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vcam1P29533 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vcam1P29533 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vcam1P29533 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vcam1P29533 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vcam1P29533 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Vcam1P29533 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vcam1P29533 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vcam1P29533 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vcam1P29533 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vcam1P29533 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vcam1P29533 Gm27989-201ENSMUST00000184721 107 ntBASIC17.25■□□□□ 0.35
Vcam1P29533 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.25■□□□□ 0.35
Vcam1P29533 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vcam1P29533 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vcam1P29533 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vcam1P29533 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vcam1P29533 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vcam1P29533 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vcam1P29533 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vcam1P29533 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC17.25■□□□□ 0.35
Vcam1P29533 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.25■□□□□ 0.35
Vcam1P29533 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Vcam1P29533 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vcam1P29533 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vcam1P29533 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
Vcam1P29533 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vcam1P29533 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vcam1P29533 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.24■□□□□ 0.35
Vcam1P29533 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vcam1P29533 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vcam1P29533 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.24■□□□□ 0.35
Vcam1P29533 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vcam1P29533 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vcam1P29533 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.24■□□□□ 0.35
Vcam1P29533 Gm27533-201ENSMUST00000183800 152 ntBASIC17.24■□□□□ 0.35
Vcam1P29533 Gm2451-201ENSMUST00000199447 999 ntBASIC17.24■□□□□ 0.35
Vcam1P29533 Gm10290-201ENSMUST00000200451 999 ntBASIC17.24■□□□□ 0.35
Vcam1P29533 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Vcam1P29533 AC125206.2-201ENSMUST00000217454 574 ntBASIC17.24■□□□□ 0.35
Vcam1P29533 Wdyhv1-203ENSMUST00000226889 394 ntBASIC17.24■□□□□ 0.35
Vcam1P29533 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vcam1P29533 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Vcam1P29533 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vcam1P29533 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vcam1P29533 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.24■□□□□ 0.35
Vcam1P29533 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vcam1P29533 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vcam1P29533 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Vcam1P29533 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vcam1P29533 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Vcam1P29533 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vcam1P29533 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vcam1P29533 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Vcam1P29533 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Vcam1P29533 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.23■□□□□ 0.35
Vcam1P29533 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vcam1P29533 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.23■□□□□ 0.35
Vcam1P29533 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC17.23■□□□□ 0.35
Vcam1P29533 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC17.23■□□□□ 0.35
Vcam1P29533 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vcam1P29533 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Vcam1P29533 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vcam1P29533 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vcam1P29533 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC17.23■□□□□ 0.35
Vcam1P29533 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vcam1P29533 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Vcam1P29533 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vcam1P29533 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vcam1P29533 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vcam1P29533 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vcam1P29533 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vcam1P29533 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vcam1P29533 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vcam1P29533 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vcam1P29533 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vcam1P29533 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vcam1P29533 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Vcam1P29533 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Vcam1P29533 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vcam1P29533 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vcam1P29533 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vcam1P29533 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Vcam1P29533 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vcam1P29533 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vcam1P29533 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.22■□□□□ 0.35
Vcam1P29533 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Vcam1P29533 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.22■□□□□ 0.35
Vcam1P29533 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC17.22■□□□□ 0.35
Vcam1P29533 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Vcam1P29533 Gm27680-201ENSMUST00000184192 160 ntBASIC17.22■□□□□ 0.35
Vcam1P29533 Gm9063-201ENSMUST00000223299 582 ntBASIC17.22■□□□□ 0.35
Vcam1P29533 CT025535.1-201ENSMUST00000227172 491 ntBASIC17.22■□□□□ 0.35
Vcam1P29533 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Vcam1P29533 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Vcam1P29533 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.22■□□□□ 0.35
Vcam1P29533 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms