Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cbx3P23198 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cbx3P23198 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cbx3P23198 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cbx3P23198 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cbx3P23198 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.76□□□□□ -0.21
Cbx3P23198 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.76□□□□□ -0.21
Cbx3P23198 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cbx3P23198 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cbx3P23198 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cbx3P23198 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cbx3P23198 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cbx3P23198 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cbx3P23198 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.76□□□□□ -0.21
Cbx3P23198 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cbx3P23198 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cbx3P23198 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cbx3P23198 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cbx3P23198 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cbx3P23198 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cbx3P23198 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.76□□□□□ -0.21
Cbx3P23198 Mir1199-201ENSMUST00000117015 119 ntBASIC13.76□□□□□ -0.21
Cbx3P23198 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cbx3P23198 Gm38027-201ENSMUST00000192315 235 ntBASIC13.76□□□□□ -0.21
Cbx3P23198 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.76□□□□□ -0.21
Cbx3P23198 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cbx3P23198 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Cbx3P23198 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cbx3P23198 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.76□□□□□ -0.21
Cbx3P23198 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cbx3P23198 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cbx3P23198 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cbx3P23198 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cbx3P23198 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cbx3P23198 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.76□□□□□ -0.21
Cbx3P23198 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cbx3P23198 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
Cbx3P23198 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Cbx3P23198 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cbx3P23198 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cbx3P23198 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cbx3P23198 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cbx3P23198 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cbx3P23198 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cbx3P23198 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Cbx3P23198 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cbx3P23198 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cbx3P23198 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cbx3P23198 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cbx3P23198 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cbx3P23198 Gm7638-201ENSMUST00000121348 967 ntBASIC13.75□□□□□ -0.21
Cbx3P23198 Gm12669-201ENSMUST00000122162 1009 ntBASIC13.75□□□□□ -0.21
Cbx3P23198 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cbx3P23198 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cbx3P23198 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cbx3P23198 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cbx3P23198 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cbx3P23198 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cbx3P23198 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.75□□□□□ -0.21
Cbx3P23198 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Cbx3P23198 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cbx3P23198 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Cbx3P23198 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cbx3P23198 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cbx3P23198 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.75□□□□□ -0.21
Cbx3P23198 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cbx3P23198 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cbx3P23198 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cbx3P23198 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cbx3P23198 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cbx3P23198 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.75□□□□□ -0.21
Cbx3P23198 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cbx3P23198 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cbx3P23198 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cbx3P23198 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cbx3P23198 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cbx3P23198 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.74□□□□□ -0.21
Cbx3P23198 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cbx3P23198 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cbx3P23198 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cbx3P23198 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cbx3P23198 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cbx3P23198 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cbx3P23198 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Cbx3P23198 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cbx3P23198 Gm10653-202ENSMUST00000139570 835 ntBASIC13.74□□□□□ -0.21
Cbx3P23198 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cbx3P23198 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.74□□□□□ -0.21
Cbx3P23198 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.74□□□□□ -0.21
Cbx3P23198 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cbx3P23198 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cbx3P23198 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cbx3P23198 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cbx3P23198 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cbx3P23198 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cbx3P23198 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cbx3P23198 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cbx3P23198 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cbx3P23198 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cbx3P23198 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms