Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
BdnfP21237 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
BdnfP21237 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
BdnfP21237 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
BdnfP21237 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
BdnfP21237 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
BdnfP21237 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
BdnfP21237 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
BdnfP21237 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
BdnfP21237 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
BdnfP21237 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
BdnfP21237 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
BdnfP21237 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.47□□□□□ -0.09
BdnfP21237 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.47□□□□□ -0.09
BdnfP21237 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.47□□□□□ -0.09
BdnfP21237 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.47□□□□□ -0.09
BdnfP21237 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
BdnfP21237 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BdnfP21237 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BdnfP21237 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
BdnfP21237 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
BdnfP21237 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
BdnfP21237 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BdnfP21237 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
BdnfP21237 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.47□□□□□ -0.09
BdnfP21237 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
BdnfP21237 Gm14859-201ENSMUST00000117752 357 ntBASIC14.47□□□□□ -0.09
BdnfP21237 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.47□□□□□ -0.09
BdnfP21237 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BdnfP21237 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.47□□□□□ -0.09
BdnfP21237 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BdnfP21237 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BdnfP21237 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BdnfP21237 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BdnfP21237 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.47□□□□□ -0.09
BdnfP21237 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.47□□□□□ -0.09
BdnfP21237 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BdnfP21237 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
BdnfP21237 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
BdnfP21237 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BdnfP21237 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BdnfP21237 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
BdnfP21237 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BdnfP21237 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BdnfP21237 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BdnfP21237 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BdnfP21237 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BdnfP21237 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BdnfP21237 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.46□□□□□ -0.09
BdnfP21237 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
BdnfP21237 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
BdnfP21237 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
BdnfP21237 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BdnfP21237 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
BdnfP21237 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BdnfP21237 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
BdnfP21237 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
BdnfP21237 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
BdnfP21237 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BdnfP21237 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BdnfP21237 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.46□□□□□ -0.09
BdnfP21237 Gm14722-201ENSMUST00000118943 689 ntBASIC14.46□□□□□ -0.09
BdnfP21237 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
BdnfP21237 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
BdnfP21237 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
BdnfP21237 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BdnfP21237 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BdnfP21237 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BdnfP21237 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BdnfP21237 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
BdnfP21237 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.46□□□□□ -0.09
BdnfP21237 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
BdnfP21237 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
BdnfP21237 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BdnfP21237 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
BdnfP21237 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
BdnfP21237 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
BdnfP21237 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
BdnfP21237 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
BdnfP21237 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
BdnfP21237 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
BdnfP21237 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
BdnfP21237 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
BdnfP21237 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
BdnfP21237 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
BdnfP21237 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
BdnfP21237 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
BdnfP21237 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
BdnfP21237 Gm4459-201ENSMUST00000118750 468 ntBASIC14.45□□□□□ -0.1
BdnfP21237 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
BdnfP21237 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
BdnfP21237 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.45□□□□□ -0.1
BdnfP21237 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.45□□□□□ -0.1
BdnfP21237 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.45□□□□□ -0.1
BdnfP21237 Gm18622-201ENSMUST00000219361 595 ntBASIC14.45□□□□□ -0.1
BdnfP21237 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.45□□□□□ -0.1
BdnfP21237 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
BdnfP21237 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
BdnfP21237 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
BdnfP21237 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms