Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tpm3P21107 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.91■□□□□ 0.3
Tpm3P21107 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tpm3P21107 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tpm3P21107 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tpm3P21107 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tpm3P21107 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tpm3P21107 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tpm3P21107 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Tpm3P21107 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Tpm3P21107 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Tpm3P21107 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.91■□□□□ 0.3
Tpm3P21107 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.91■□□□□ 0.3
Tpm3P21107 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.91■□□□□ 0.3
Tpm3P21107 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tpm3P21107 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tpm3P21107 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Tpm3P21107 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tpm3P21107 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tpm3P21107 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tpm3P21107 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Tpm3P21107 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tpm3P21107 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tpm3P21107 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Tpm3P21107 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tpm3P21107 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm3P21107 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC16.9■□□□□ 0.3
Tpm3P21107 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC16.9■□□□□ 0.3
Tpm3P21107 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm3P21107 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm3P21107 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Tpm3P21107 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm3P21107 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm3P21107 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Tpm3P21107 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm3P21107 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm3P21107 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm3P21107 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm3P21107 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Tpm3P21107 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm3P21107 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.9■□□□□ 0.3
Tpm3P21107 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.9■□□□□ 0.3
Tpm3P21107 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.9■□□□□ 0.3
Tpm3P21107 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Tpm3P21107 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.9■□□□□ 0.3
Tpm3P21107 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm3P21107 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm3P21107 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm3P21107 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm3P21107 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm3P21107 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.9■□□□□ 0.3
Tpm3P21107 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm3P21107 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm3P21107 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.9■□□□□ 0.3
Tpm3P21107 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm3P21107 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm3P21107 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm3P21107 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC16.9■□□□□ 0.3
Tpm3P21107 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm3P21107 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm3P21107 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm3P21107 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Tpm3P21107 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tpm3P21107 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.89■□□□□ 0.3
Tpm3P21107 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Tpm3P21107 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm3P21107 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm3P21107 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm3P21107 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm3P21107 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm3P21107 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC16.89■□□□□ 0.29
Tpm3P21107 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.89■□□□□ 0.29
Tpm3P21107 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm3P21107 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm3P21107 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm3P21107 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm3P21107 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Tpm3P21107 Gm15039-201ENSMUST00000118914 875 ntBASIC16.89■□□□□ 0.29
Tpm3P21107 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.89■□□□□ 0.29
Tpm3P21107 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm3P21107 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.89■□□□□ 0.29
Tpm3P21107 Mir5130-201ENSMUST00000175160 84 ntBASIC16.89■□□□□ 0.29
Tpm3P21107 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Tpm3P21107 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm3P21107 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm3P21107 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm3P21107 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.89■□□□□ 0.29
Tpm3P21107 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm3P21107 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC16.89■□□□□ 0.29
Tpm3P21107 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm3P21107 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm3P21107 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm3P21107 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm3P21107 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm3P21107 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tpm3P21107 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.88■□□□□ 0.29
Tpm3P21107 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tpm3P21107 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tpm3P21107 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tpm3P21107 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms