Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TP20293 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.23□□□□□ -0.13
TP20293 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.23□□□□□ -0.13
TP20293 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
TP20293 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TP20293 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TP20293 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TP20293 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TP20293 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.23□□□□□ -0.13
TP20293 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
TP20293 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TP20293 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.23□□□□□ -0.13
TP20293 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.23□□□□□ -0.13
TP20293 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
TP20293 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TP20293 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TP20293 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TP20293 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
TP20293 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.22□□□□□ -0.13
TP20293 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TP20293 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
TP20293 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TP20293 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.22□□□□□ -0.13
TP20293 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TP20293 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TP20293 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TP20293 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TP20293 Gm6550-201ENSMUST00000187574 993 ntBASIC14.22□□□□□ -0.13
TP20293 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TP20293 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.22□□□□□ -0.13
TP20293 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TP20293 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TP20293 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TP20293 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TP20293 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TP20293 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TP20293 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TP20293 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TP20293 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
TP20293 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TP20293 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TP20293 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TP20293 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TP20293 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TP20293 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TP20293 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TP20293 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TP20293 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TP20293 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TP20293 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TP20293 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TP20293 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TP20293 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TP20293 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TP20293 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TP20293 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TP20293 Gm11764-201ENSMUST00000120221 623 ntBASIC14.21□□□□□ -0.13
TP20293 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TP20293 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.21□□□□□ -0.13
TP20293 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.21□□□□□ -0.13
TP20293 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.21□□□□□ -0.13
TP20293 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.21□□□□□ -0.13
TP20293 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.21□□□□□ -0.13
TP20293 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TP20293 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
TP20293 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TP20293 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.21□□□□□ -0.13
TP20293 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TP20293 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TP20293 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TP20293 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TP20293 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TP20293 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TP20293 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.21□□□□□ -0.13
TP20293 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TP20293 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TP20293 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
TP20293 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TP20293 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
TP20293 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
TP20293 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TP20293 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.21□□□□□ -0.14
TP20293 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TP20293 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TP20293 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TP20293 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TP20293 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TP20293 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TP20293 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TP20293 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TP20293 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TP20293 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.2□□□□□ -0.14
TP20293 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TP20293 Gm15173-201ENSMUST00000122049 433 ntBASIC14.2□□□□□ -0.14
TP20293 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.2□□□□□ -0.14
TP20293 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.2□□□□□ -0.14
TP20293 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.2□□□□□ -0.14
TP20293 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
TP20293 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TP20293 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms