Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp53P15975 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp53P15975 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Usp53P15975 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp53P15975 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Usp53P15975 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Usp53P15975 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Usp53P15975 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.42■□□□□ 0.38
Usp53P15975 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.42■□□□□ 0.38
Usp53P15975 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.42■□□□□ 0.38
Usp53P15975 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.42■□□□□ 0.38
Usp53P15975 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp53P15975 Gm8396-201ENSMUST00000057361 823 ntBASIC17.42■□□□□ 0.38
Usp53P15975 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp53P15975 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp53P15975 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.42■□□□□ 0.38
Usp53P15975 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Usp53P15975 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Usp53P15975 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp53P15975 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.42■□□□□ 0.38
Usp53P15975 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp53P15975 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp53P15975 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp53P15975 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.42■□□□□ 0.38
Usp53P15975 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Usp53P15975 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp53P15975 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Usp53P15975 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp53P15975 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp53P15975 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.41■□□□□ 0.38
Usp53P15975 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp53P15975 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Usp53P15975 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp53P15975 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp53P15975 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Usp53P15975 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp53P15975 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp53P15975 Rprl2-201ENSMUST00000157150 290 ntBASIC17.41■□□□□ 0.38
Usp53P15975 Mir6990-201ENSMUST00000183724 91 ntBASIC17.41■□□□□ 0.38
Usp53P15975 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp53P15975 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp53P15975 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Usp53P15975 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp53P15975 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp53P15975 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp53P15975 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp53P15975 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp53P15975 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp53P15975 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Usp53P15975 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp53P15975 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp53P15975 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp53P15975 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp53P15975 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Usp53P15975 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp53P15975 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp53P15975 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp53P15975 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Usp53P15975 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Usp53P15975 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.4■□□□□ 0.38
Usp53P15975 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.4■□□□□ 0.38
Usp53P15975 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.4■□□□□ 0.38
Usp53P15975 Gm15483-201ENSMUST00000120338 456 ntBASIC17.4■□□□□ 0.38
Usp53P15975 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp53P15975 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.4■□□□□ 0.38
Usp53P15975 Gm43474-201ENSMUST00000196415 774 ntBASIC17.4■□□□□ 0.38
Usp53P15975 Gm43767-201ENSMUST00000198933 381 ntBASIC17.4■□□□□ 0.38
Usp53P15975 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp53P15975 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp53P15975 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp53P15975 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Usp53P15975 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.4■□□□□ 0.38
Usp53P15975 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp53P15975 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp53P15975 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Usp53P15975 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp53P15975 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp53P15975 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp53P15975 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp53P15975 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp53P15975 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.39■□□□□ 0.37
Usp53P15975 Gm6973-201ENSMUST00000117080 721 ntBASIC17.39■□□□□ 0.37
Usp53P15975 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp53P15975 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.39■□□□□ 0.37
Usp53P15975 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Usp53P15975 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Usp53P15975 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp53P15975 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.39■□□□□ 0.37
Usp53P15975 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.39■□□□□ 0.37
Usp53P15975 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp53P15975 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp53P15975 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp53P15975 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp53P15975 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp53P15975 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Usp53P15975 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Usp53P15975 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp53P15975 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Usp53P15975 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Usp53P15975 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms