Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cntn1P12960 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cntn1P12960 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cntn1P12960 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cntn1P12960 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cntn1P12960 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Cntn1P12960 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cntn1P12960 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cntn1P12960 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cntn1P12960 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cntn1P12960 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cntn1P12960 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cntn1P12960 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cntn1P12960 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.46□□□□□ -0.09
Cntn1P12960 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cntn1P12960 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cntn1P12960 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cntn1P12960 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cntn1P12960 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cntn1P12960 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Cntn1P12960 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cntn1P12960 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cntn1P12960 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cntn1P12960 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cntn1P12960 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cntn1P12960 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cntn1P12960 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cntn1P12960 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cntn1P12960 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cntn1P12960 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cntn1P12960 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Cntn1P12960 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cntn1P12960 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.45□□□□□ -0.1
Cntn1P12960 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Cntn1P12960 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.45□□□□□ -0.1
Cntn1P12960 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cntn1P12960 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cntn1P12960 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.45□□□□□ -0.1
Cntn1P12960 Gm16198-201ENSMUST00000118766 670 ntBASIC14.45□□□□□ -0.1
Cntn1P12960 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cntn1P12960 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.45□□□□□ -0.1
Cntn1P12960 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.45□□□□□ -0.1
Cntn1P12960 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.45□□□□□ -0.1
Cntn1P12960 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.45□□□□□ -0.1
Cntn1P12960 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.45□□□□□ -0.1
Cntn1P12960 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Cntn1P12960 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cntn1P12960 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.45□□□□□ -0.1
Cntn1P12960 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cntn1P12960 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.45□□□□□ -0.1
Cntn1P12960 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.45□□□□□ -0.1
Cntn1P12960 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.45□□□□□ -0.1
Cntn1P12960 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cntn1P12960 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cntn1P12960 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cntn1P12960 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cntn1P12960 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cntn1P12960 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cntn1P12960 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cntn1P12960 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cntn1P12960 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cntn1P12960 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cntn1P12960 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cntn1P12960 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cntn1P12960 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cntn1P12960 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cntn1P12960 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cntn1P12960 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cntn1P12960 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cntn1P12960 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cntn1P12960 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cntn1P12960 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cntn1P12960 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cntn1P12960 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cntn1P12960 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cntn1P12960 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cntn1P12960 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cntn1P12960 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cntn1P12960 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cntn1P12960 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cntn1P12960 Gm9385-201ENSMUST00000117563 472 ntBASIC14.44□□□□□ -0.1
Cntn1P12960 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cntn1P12960 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cntn1P12960 Gm26308-201ENSMUST00000157768 69 ntBASIC14.44□□□□□ -0.1
Cntn1P12960 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cntn1P12960 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.44□□□□□ -0.1
Cntn1P12960 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.44□□□□□ -0.1
Cntn1P12960 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cntn1P12960 Chchd1-203ENSMUST00000224633 557 ntBASIC14.44□□□□□ -0.1
Cntn1P12960 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.44□□□□□ -0.1
Cntn1P12960 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cntn1P12960 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cntn1P12960 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.44□□□□□ -0.1
Cntn1P12960 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.44□□□□□ -0.1
Cntn1P12960 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cntn1P12960 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cntn1P12960 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cntn1P12960 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cntn1P12960 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cntn1P12960 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms