Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccl1P10146 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccl1P10146 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Ccl1P10146 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccl1P10146 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.73□□□□□ -0.53
Ccl1P10146 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccl1P10146 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccl1P10146 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.73□□□□□ -0.53
Ccl1P10146 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccl1P10146 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Ccl1P10146 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccl1P10146 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccl1P10146 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ccl1P10146 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl1P10146 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl1P10146 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl1P10146 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ccl1P10146 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl1P10146 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl1P10146 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl1P10146 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Ccl1P10146 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl1P10146 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl1P10146 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl1P10146 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.72□□□□□ -0.53
Ccl1P10146 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl1P10146 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Ccl1P10146 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl1P10146 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC11.72□□□□□ -0.53
Ccl1P10146 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl1P10146 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl1P10146 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl1P10146 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl1P10146 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl1P10146 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC11.72□□□□□ -0.53
Ccl1P10146 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Ccl1P10146 Gm29994-201ENSMUST00000195495 1193 ntBASIC11.72□□□□□ -0.53
Ccl1P10146 Gm44430-201ENSMUST00000203376 995 ntBASIC11.72□□□□□ -0.53
Ccl1P10146 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl1P10146 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl1P10146 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl1P10146 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl1P10146 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl1P10146 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl1P10146 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Ccl1P10146 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Ccl1P10146 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccl1P10146 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl1P10146 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Ccl1P10146 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl1P10146 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl1P10146 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Ccl1P10146 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl1P10146 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Ccl1P10146 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Ccl1P10146 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl1P10146 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl1P10146 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Ccl1P10146 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Ccl1P10146 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Ccl1P10146 Gm16061-201ENSMUST00000122167 857 ntBASIC11.71□□□□□ -0.53
Ccl1P10146 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl1P10146 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC11.71□□□□□ -0.53
Ccl1P10146 Gm26039-201ENSMUST00000158152 144 ntBASIC11.71□□□□□ -0.53
Ccl1P10146 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Ccl1P10146 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl1P10146 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC11.71□□□□□ -0.53
Ccl1P10146 AC154649.1-201ENSMUST00000227392 384 ntBASIC11.71□□□□□ -0.53
Ccl1P10146 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl1P10146 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Ccl1P10146 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl1P10146 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl1P10146 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccl1P10146 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccl1P10146 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccl1P10146 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
Ccl1P10146 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccl1P10146 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccl1P10146 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccl1P10146 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ccl1P10146 Gm13337-201ENSMUST00000119183 1594 ntBASIC11.71□□□□□ -0.54
Ccl1P10146 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.71□□□□□ -0.54
Ccl1P10146 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ccl1P10146 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl1P10146 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ccl1P10146 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl1P10146 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl1P10146 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl1P10146 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl1P10146 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl1P10146 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
Ccl1P10146 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Ccl1P10146 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Ccl1P10146 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl1P10146 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.7□□□□□ -0.54
Ccl1P10146 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ccl1P10146 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl1P10146 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl1P10146 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ccl1P10146 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms