Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Rc3h2P0C090 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rc3h2P0C090 Gm25948-201ENSMUST00000175334 112 ntBASIC15.32■□□□□ 0.04
Rc3h2P0C090 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.32■□□□□ 0.04
Rc3h2P0C090 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.32■□□□□ 0.04
Rc3h2P0C090 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rc3h2P0C090 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rc3h2P0C090 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rc3h2P0C090 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rc3h2P0C090 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rc3h2P0C090 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rc3h2P0C090 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rc3h2P0C090 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rc3h2P0C090 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h2P0C090 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h2P0C090 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h2P0C090 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.31■□□□□ 0.04
Rc3h2P0C090 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h2P0C090 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h2P0C090 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h2P0C090 Gm22065-201ENSMUST00000103753 110 ntBASIC15.31■□□□□ 0.04
Rc3h2P0C090 Gm22066-201ENSMUST00000103761 110 ntBASIC15.31■□□□□ 0.04
Rc3h2P0C090 Gm24932-201ENSMUST00000103763 110 ntBASIC15.31■□□□□ 0.04
Rc3h2P0C090 Gm24115-201ENSMUST00000103799 110 ntBASIC15.31■□□□□ 0.04
Rc3h2P0C090 Gm22190-201ENSMUST00000103827 110 ntBASIC15.31■□□□□ 0.04
Rc3h2P0C090 Gm22191-201ENSMUST00000103831 110 ntBASIC15.31■□□□□ 0.04
Rc3h2P0C090 Gm24721-201ENSMUST00000103849 110 ntBASIC15.31■□□□□ 0.04
Rc3h2P0C090 Gm28018-201ENSMUST00000103869 110 ntBASIC15.31■□□□□ 0.04
Rc3h2P0C090 Gm26399-201ENSMUST00000103937 110 ntBASIC15.31■□□□□ 0.04
Rc3h2P0C090 Mir449b-201ENSMUST00000104833 80 ntBASIC15.31■□□□□ 0.04
Rc3h2P0C090 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h2P0C090 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.31■□□□□ 0.04
Rc3h2P0C090 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.31■□□□□ 0.04
Rc3h2P0C090 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.31■□□□□ 0.04
Rc3h2P0C090 Gm25349-201ENSMUST00000177728 110 ntBASIC15.31■□□□□ 0.04
Rc3h2P0C090 Gm23616-201ENSMUST00000177797 110 ntBASIC15.31■□□□□ 0.04
Rc3h2P0C090 Gm25871-201ENSMUST00000177816 110 ntBASIC15.31■□□□□ 0.04
Rc3h2P0C090 Gm24752-201ENSMUST00000178240 110 ntBASIC15.31■□□□□ 0.04
Rc3h2P0C090 Gm24496-201ENSMUST00000178287 110 ntBASIC15.31■□□□□ 0.04
Rc3h2P0C090 Gm25649-201ENSMUST00000178476 110 ntBASIC15.31■□□□□ 0.04
Rc3h2P0C090 Gm25548-201ENSMUST00000178681 110 ntBASIC15.31■□□□□ 0.04
Rc3h2P0C090 Gm23147-201ENSMUST00000178841 110 ntBASIC15.31■□□□□ 0.04
Rc3h2P0C090 Gm26095-201ENSMUST00000179270 110 ntBASIC15.31■□□□□ 0.04
Rc3h2P0C090 Gm22171-201ENSMUST00000179283 110 ntBASIC15.31■□□□□ 0.04
Rc3h2P0C090 Gm23936-201ENSMUST00000179354 110 ntBASIC15.31■□□□□ 0.04
Rc3h2P0C090 Gm22619-201ENSMUST00000179516 110 ntBASIC15.31■□□□□ 0.04
Rc3h2P0C090 Gm25255-201ENSMUST00000179579 110 ntBASIC15.31■□□□□ 0.04
Rc3h2P0C090 Gm24755-201ENSMUST00000179691 110 ntBASIC15.31■□□□□ 0.04
Rc3h2P0C090 Gm26506-201ENSMUST00000179692 110 ntBASIC15.31■□□□□ 0.04
Rc3h2P0C090 Gm25086-201ENSMUST00000179931 110 ntBASIC15.31■□□□□ 0.04
Rc3h2P0C090 Gm23243-201ENSMUST00000180047 110 ntBASIC15.31■□□□□ 0.04
Rc3h2P0C090 Gm24659-201ENSMUST00000180212 110 ntBASIC15.31■□□□□ 0.04
Rc3h2P0C090 Gm24169-201ENSMUST00000180244 110 ntBASIC15.31■□□□□ 0.04
Rc3h2P0C090 Gm23689-201ENSMUST00000180354 110 ntBASIC15.31■□□□□ 0.04
Rc3h2P0C090 Gm27359-201ENSMUST00000184153 110 ntBASIC15.31■□□□□ 0.04
Rc3h2P0C090 Gm27785-201ENSMUST00000184268 110 ntBASIC15.31■□□□□ 0.04
Rc3h2P0C090 Gm27466-201ENSMUST00000184396 110 ntBASIC15.31■□□□□ 0.04
Rc3h2P0C090 Gm27703-201ENSMUST00000184836 110 ntBASIC15.31■□□□□ 0.04
Rc3h2P0C090 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h2P0C090 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.31■□□□□ 0.04
Rc3h2P0C090 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.31■□□□□ 0.04
Rc3h2P0C090 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.31■□□□□ 0.04
Rc3h2P0C090 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.31■□□□□ 0.04
Rc3h2P0C090 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.31■□□□□ 0.04
Rc3h2P0C090 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h2P0C090 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Rc3h2P0C090 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h2P0C090 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h2P0C090 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h2P0C090 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h2P0C090 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h2P0C090 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h2P0C090 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h2P0C090 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rc3h2P0C090 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h2P0C090 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h2P0C090 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rc3h2P0C090 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rc3h2P0C090 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rc3h2P0C090 Prob1-201ENSMUST00000097619 3021 ntBASIC15.3■□□□□ 0.04
Rc3h2P0C090 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rc3h2P0C090 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rc3h2P0C090 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rc3h2P0C090 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.3■□□□□ 0.04
Rc3h2P0C090 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Rc3h2P0C090 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rc3h2P0C090 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rc3h2P0C090 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rc3h2P0C090 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rc3h2P0C090 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rc3h2P0C090 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
Rc3h2P0C090 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.3■□□□□ 0.04
Rc3h2P0C090 AA543401-201ENSMUST00000164248 1269 ntBASIC15.3■□□□□ 0.04
Rc3h2P0C090 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.3■□□□□ 0.04
Rc3h2P0C090 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.3■□□□□ 0.04
Rc3h2P0C090 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rc3h2P0C090 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.3■□□□□ 0.04
Rc3h2P0C090 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rc3h2P0C090 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rc3h2P0C090 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms