Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
P06344 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
P06344 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
P06344 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
P06344 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
P06344 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
P06344 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
P06344 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
P06344 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
P06344 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
P06344 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.43□□□□□ -0.26
P06344 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.43□□□□□ -0.26
P06344 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.43□□□□□ -0.26
P06344 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.43□□□□□ -0.26
P06344 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.43□□□□□ -0.26
P06344 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
P06344 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
P06344 Gm17271-201ENSMUST00000165535 355 ntBASIC13.43□□□□□ -0.26
P06344 Gm27397-201ENSMUST00000184997 107 ntBASIC13.43□□□□□ -0.26
P06344 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.43□□□□□ -0.26
P06344 Gm2756-201ENSMUST00000195851 400 ntBASIC13.43□□□□□ -0.26
P06344 Gm44492-201ENSMUST00000197012 141 ntBASIC13.43□□□□□ -0.26
P06344 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.43□□□□□ -0.26
P06344 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
P06344 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
P06344 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
P06344 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
P06344 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
P06344 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
P06344 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
P06344 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.43□□□□□ -0.26
P06344 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.43□□□□□ -0.26
P06344 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
P06344 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
P06344 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
P06344 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
P06344 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
P06344 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
P06344 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
P06344 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
P06344 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
P06344 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.42□□□□□ -0.26
P06344 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
P06344 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
P06344 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
P06344 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.42□□□□□ -0.26
P06344 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
P06344 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
P06344 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
P06344 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
P06344 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
P06344 Gm12008-201ENSMUST00000117791 755 ntBASIC13.42□□□□□ -0.26
P06344 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
P06344 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
P06344 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.42□□□□□ -0.26
P06344 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.42□□□□□ -0.26
P06344 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
P06344 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
P06344 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
P06344 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
P06344 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
P06344 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
P06344 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
P06344 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
P06344 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
P06344 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
P06344 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
P06344 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
P06344 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
P06344 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
P06344 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
P06344 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
P06344 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
P06344 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
P06344 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
P06344 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
P06344 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
P06344 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.41□□□□□ -0.26
P06344 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.41□□□□□ -0.26
P06344 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
P06344 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
P06344 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
P06344 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
P06344 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
P06344 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
P06344 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
P06344 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
P06344 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
P06344 Gm6736-201ENSMUST00000166583 948 ntBASIC13.41□□□□□ -0.26
P06344 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
P06344 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
P06344 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
P06344 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
P06344 Gm45747-201ENSMUST00000212203 999 ntBASIC13.41□□□□□ -0.26
P06344 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
P06344 Thap2-203ENSMUST00000218989 527 ntBASIC13.41□□□□□ -0.26
P06344 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
P06344 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
P06344 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
P06344 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms